| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
Click here to switch to the map view.
The map label for this gene is 28212129
Identifier: 28212129
GI number: 28212129
Start: 2709970
End: 2710974
Strand: Direct
Name: 28212129
Synonym: CTC02550
Alternate gene names: NA
Gene position: 2709970-2710974 (Clockwise)
Preceding gene: 28212113
Following gene: 28212130
Centisome position: 96.81
GC content: 22.59
Gene sequence:
>1005_bases GTGAGGAGGGATATTATGAAATTTAATAAAAATATTAGGAATATAACCTTATCTATACTTTTAATATTCTCTATTTCTAT ACCCATATTTACTTTAATTTACTTTAATAAAAATAGTGAAATAATACAATATAACAAATCTATACATACAGATGTAAATA ATATAAACAAAATTAATAAAAAAGTTTCTTCTTACACCATTAGCGGTAAATTTAATGCATCAAAGTGTAGAGATCACTTA CCTAATGATGTAAAAACCTTATTATCCACAAAAGTCAATCTTGAAAAATATAAATGTAATGAAAAGTATAAGGATATGCA TAATAATCTTATTAAAGCTGTTACTAATAATATATATACATATGAGCAACTTTTAGCTATATTAAATAGTCCAGAAAGTC AAGATGTTAATAAAGCCTTTTCTTCTTTTAAGAAATATAAAGAGCATAGTATAAAGTTTTATGAATTGTTTAATAATAAC AATCGTAGATTAAAAATAAATTTAAATAAAGATTTTTTAGGTTATCTAAATCTCTCTACTGCATATATTGAAGAACTAGC TAATTTGCAAAAGGATAGAGATATAAAAATGAGTCAGTATAAGGATTATTTTTATAGTATCGATTATGTTTTATCTTCTT TTTTAGAAGTAAGAAAAGATTTTTCTTACTATAAGGGTAAAATTGAAAATGGGACTATTGACATAAATGAACTTTTAAAT GAGATTTCAACAAATAAAAAAGAATTACAAGATCTAAAAATAGATGTATCTAAAATTTCTGTACCCTCTGATGGAATAGA TTGCTATATCTTATTATCAAAAGCTTTAGATGATTATATATCTTATATTCATAGTTTTGAAGAAGATATAAGCAAAAGTG CTATTTCACCTAAGTCTACAGTTTCAAAACTGTATTCACAATCAGATCTAAATTACAAGATCATGAATGATACTTATAAT GACTTTATAAAATATTACTCTAATTTAAAAGATACAGTAAAATAA
Upstream 100 bases:
>100_bases CACTATATAAAAATATTTAAAAAATATTTAAATCTTAATTTTTTATGAAACTTAATTTTTTATATAGTAATTTTACTGCT ATTTTAGGAATATCTATAAT
Downstream 100 bases:
>100_bases TGAATGTTTTATTGAATGTATAATTTCATAAATAAAGTTAATAATAACATAAGCCTAAGTTTAAAACGCGGGGGAACCAT TAATTGGGGTGAATCACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MRRDIMKFNKNIRNITLSILLIFSISIPIFTLIYFNKNSEIIQYNKSIHTDVNNINKINKKVSSYTISGKFNASKCRDHL PNDVKTLLSTKVNLEKYKCNEKYKDMHNNLIKAVTNNIYTYEQLLAILNSPESQDVNKAFSSFKKYKEHSIKFYELFNNN NRRLKINLNKDFLGYLNLSTAYIEELANLQKDRDIKMSQYKDYFYSIDYVLSSFLEVRKDFSYYKGKIENGTIDINELLN EISTNKKELQDLKIDVSKISVPSDGIDCYILLSKALDDYISYIHSFEEDISKSAISPKSTVSKLYSQSDLNYKIMNDTYN DFIKYYSNLKDTVK
Sequences:
>Translated_334_residues MRRDIMKFNKNIRNITLSILLIFSISIPIFTLIYFNKNSEIIQYNKSIHTDVNNINKINKKVSSYTISGKFNASKCRDHL PNDVKTLLSTKVNLEKYKCNEKYKDMHNNLIKAVTNNIYTYEQLLAILNSPESQDVNKAFSSFKKYKEHSIKFYELFNNN NRRLKINLNKDFLGYLNLSTAYIEELANLQKDRDIKMSQYKDYFYSIDYVLSSFLEVRKDFSYYKGKIENGTIDINELLN EISTNKKELQDLKIDVSKISVPSDGIDCYILLSKALDDYISYIHSFEEDISKSAISPKSTVSKLYSQSDLNYKIMNDTYN DFIKYYSNLKDTVK >Mature_334_residues MRRDIMKFNKNIRNITLSILLIFSISIPIFTLIYFNKNSEIIQYNKSIHTDVNNINKINKKVSSYTISGKFNASKCRDHL PNDVKTLLSTKVNLEKYKCNEKYKDMHNNLIKAVTNNIYTYEQLLAILNSPESQDVNKAFSSFKKYKEHSIKFYELFNNN NRRLKINLNKDFLGYLNLSTAYIEELANLQKDRDIKMSQYKDYFYSIDYVLSSFLEVRKDFSYYKGKIENGTIDINELLN EISTNKKELQDLKIDVSKISVPSDGIDCYILLSKALDDYISYIHSFEEDISKSAISPKSTVSKLYSQSDLNYKIMNDTYN DFIKYYSNLKDTVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39181; Mature: 39181
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDIMKFNKNIRNITLSILLIFSISIPIFTLIYFNKNSEIIQYNKSIHTDVNNINKINK CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCHHHCCHHHHHHHHH KVSSYTISGKFNASKCRDHLPNDVKTLLSTKVNLEKYKCNEKYKDMHNNLIKAVTNNIYT HHHHEEEECCCCHHHHHHHCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCHHH YEQLLAILNSPESQDVNKAFSSFKKYKEHSIKFYELFNNNNRRLKINLNKDFLGYLNLST HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCEEEEEECCCHHHHHHHHH AYIEELANLQKDRDIKMSQYKDYFYSIDYVLSSFLEVRKDFSYYKGKIENGTIDINELLN HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHH EISTNKKELQDLKIDVSKISVPSDGIDCYILLSKALDDYISYIHSFEEDISKSAISPKST HHCCCHHHHHHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VSKLYSQSDLNYKIMNDTYNDFIKYYSNLKDTVK HHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRRDIMKFNKNIRNITLSILLIFSISIPIFTLIYFNKNSEIIQYNKSIHTDVNNINKINK CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCHHHCCHHHHHHHHH KVSSYTISGKFNASKCRDHLPNDVKTLLSTKVNLEKYKCNEKYKDMHNNLIKAVTNNIYT HHHHEEEECCCCHHHHHHHCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCHHH YEQLLAILNSPESQDVNKAFSSFKKYKEHSIKFYELFNNNNRRLKINLNKDFLGYLNLST HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCEEEEEECCCHHHHHHHHH AYIEELANLQKDRDIKMSQYKDYFYSIDYVLSSFLEVRKDFSYYKGKIENGTIDINELLN HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHH EISTNKKELQDLKIDVSKISVPSDGIDCYILLSKALDDYISYIHSFEEDISKSAISPKST HHCCCHHHHHHHHEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VSKLYSQSDLNYKIMNDTYNDFIKYYSNLKDTVK HHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA