Click here to switch to the map view.

The map label for this gene is 28211763

Identifier: 28211763

GI number: 28211763

Start: 2279470

End: 2279880

Strand: Direct

Name: 28211763

Synonym: CTC02150

Alternate gene names: NA

Gene position: 2279470-2279880 (Clockwise)

Preceding gene: 28211750

Following gene: 28211764

Centisome position: 81.43

GC content: 23.84

Gene sequence:

>411_bases
GTGATTGATTTGTTAGGTAAAAAAATTAAATCCTTAAGAAAAGATAACAAAATTACTCAAGAAGAATTAGCTATAAAAAT
TGGCGTTAGTACATCTATGGTAGGTATGTATGAAACAGATGCACGTAAACCAAGTTATGAAGTATTAATTAAAATCGCTG
ATTATTTCAAAGTTTCACTAGATTATCTGCTTCGTGAAACAGAGTATAAAACTTATATTGGTACAAAAGAAAATTGTATA
AAGTTTAAAACTGTTGAAGAGGCAATGCAATTTATTTTAAAACAACCTGTTGTTATAAATTTTTGTGAATTTAATGTAGA
TAAAATGACTAATAGAGATTTAATAGAATTTGCAAATGAACTTTTAAATCAACTAAAATTAATATCTTATAAATATAAGA
ATAACATTTAA

Upstream 100 bases:

>100_bases
TATAGCTTTATTTATCACTATTAGTTGTATTGTTATTATTATCACTATGGGTTATAATAATAACGTATTTAAATATACCC
ATATTAATGTTAGGTAAGAG

Downstream 100 bases:

>100_bases
TTTAAAAATGGAGGATGATTTTATGAGGGCGGTAGCATATGCTAGATTTAGTTCTGATAATCAAAGAGAAGAATCCATTG
AAGCTCAAATTATGGACATA

Product: transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Transcriptional Regulator SinR

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MIDLLGKKIKSLRKDNKITQEELAIKIGVSTSMVGMYETDARKPSYEVLIKIADYFKVSLDYLLRETEYKTYIGTKENCI
KFKTVEEAMQFILKQPVVINFCEFNVDKMTNRDLIEFANELLNQLKLISYKYKNNI

Sequences:

>Translated_136_residues
MIDLLGKKIKSLRKDNKITQEELAIKIGVSTSMVGMYETDARKPSYEVLIKIADYFKVSLDYLLRETEYKTYIGTKENCI
KFKTVEEAMQFILKQPVVINFCEFNVDKMTNRDLIEFANELLNQLKLISYKYKNNI
>Mature_136_residues
MIDLLGKKIKSLRKDNKITQEELAIKIGVSTSMVGMYETDARKPSYEVLIKIADYFKVSLDYLLRETEYKTYIGTKENCI
KFKTVEEAMQFILKQPVVINFCEFNVDKMTNRDLIEFANELLNQLKLISYKYKNNI

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15966; Mature: 15966

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLLGKKIKSLRKDNKITQEELAIKIGVSTSMVGMYETDARKPSYEVLIKIADYFKVSL
CCCHHHHHHHHHHHCCCCCHHHHEEEECCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHH
DYLLRETEYKTYIGTKENCIKFKTVEEAMQFILKQPVVINFCEFNVDKMTNRDLIEFANE
HHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCHHHHHHHH
LLNQLKLISYKYKNNI
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIDLLGKKIKSLRKDNKITQEELAIKIGVSTSMVGMYETDARKPSYEVLIKIADYFKVSL
CCCHHHHHHHHHHHCCCCCHHHHEEEECCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHH
DYLLRETEYKTYIGTKENCIKFKTVEEAMQFILKQPVVINFCEFNVDKMTNRDLIEFANE
HHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCHHHHHHHH
LLNQLKLISYKYKNNI
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA