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The map label for this gene is ydcQ [C]

Identifier: 28211750

GI number: 28211750

Start: 2268063

End: 2268470

Strand: Direct

Name: ydcQ [C]

Synonym: CTC02135

Alternate gene names: 28211750

Gene position: 2268063-2268470 (Clockwise)

Preceding gene: 28211722

Following gene: 28211763

Centisome position: 81.02

GC content: 32.11

Gene sequence:

>408_bases
TTGGATAAATATATTTTCTCTGCTATATTTGAACCTGGTGAAACTAAAGGTTATTGTGTAACCTTCCCTGATTTACCTGG
ATGTATAACAGAAGGTGATACTTTAGAAGAATCTTTGTTAATGGCAAAAGAAGCATTAGAATTACATCTATACGGACTTG
AGGAGGATAATGGCGATATTCCTCTAGCAACTTTACCAGAAAAAATAAATTCTCCTGATAGTTCTTTTATAGTACCTATA
GAGGTTTATATGCCTTTAGTAAGGAATGAAATGTCTAATAAGGCAATAAAAAAGACCTTAACCATTCCTTACTGGCTTAA
TAAAATTGCAGAAGATAAAAAAGTTAACTTCTCCCAAACACTCCAAGTAGCTTTAAAAGAACAACTCGGTGTACAGGATT
ATAAATAA

Upstream 100 bases:

>100_bases
AAAAACTTTAAACTCAATCCTAAAACAAGCAGGGCTTAAATAGCCCTCCTTGTTACAAGGATTTAATATATAAAATAAAA
ATTAAAAGGAGGTTTCTATA

Downstream 100 bases:

>100_bases
TTATTAATATAATTTAAAAGAGGTAAATTTATTTTACCTCTTTTGTTTTTGTCTAATAACTTCATTTACTTTTTTATAAC
TTCTTTCTTGCCCACCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MDKYIFSAIFEPGETKGYCVTFPDLPGCITEGDTLEESLLMAKEALELHLYGLEEDNGDIPLATLPEKINSPDSSFIVPI
EVYMPLVRNEMSNKAIKKTLTIPYWLNKIAEDKKVNFSQTLQVALKEQLGVQDYK

Sequences:

>Translated_135_residues
MDKYIFSAIFEPGETKGYCVTFPDLPGCITEGDTLEESLLMAKEALELHLYGLEEDNGDIPLATLPEKINSPDSSFIVPI
EVYMPLVRNEMSNKAIKKTLTIPYWLNKIAEDKKVNFSQTLQVALKEQLGVQDYK
>Mature_135_residues
MDKYIFSAIFEPGETKGYCVTFPDLPGCITEGDTLEESLLMAKEALELHLYGLEEDNGDIPLATLPEKINSPDSSFIVPI
EVYMPLVRNEMSNKAIKKTLTIPYWLNKIAEDKKVNFSQTLQVALKEQLGVQDYK

Specific function: Unknown

COG id: COG1598

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15233; Mature: 15233

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKYIFSAIFEPGETKGYCVTFPDLPGCITEGDTLEESLLMAKEALELHLYGLEEDNGDI
CCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCC
PLATLPEKINSPDSSFIVPIEVYMPLVRNEMSNKAIKKTLTIPYWLNKIAEDKKVNFSQT
CCEECCHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHH
LQVALKEQLGVQDYK
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MDKYIFSAIFEPGETKGYCVTFPDLPGCITEGDTLEESLLMAKEALELHLYGLEEDNGDI
CCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCC
PLATLPEKINSPDSSFIVPIEVYMPLVRNEMSNKAIKKTLTIPYWLNKIAEDKKVNFSQT
CCEECCHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHH
LQVALKEQLGVQDYK
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA