| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is yqgS [H]
Identifier: 28211571
GI number: 28211571
Start: 2065939
End: 2067807
Strand: Direct
Name: yqgS [H]
Synonym: CTC01943
Alternate gene names: 28211571
Gene position: 2065939-2067807 (Clockwise)
Preceding gene: 28211563
Following gene: 28211574
Centisome position: 73.8
GC content: 25.68
Gene sequence:
>1869_bases ATGAAAAAAACTTTGAATTATATTTTCAAAAATTTTATAGACATAATAGCTTTTATAGTTTTTCTTACAATTAAATTATT AATATACGGAAAAACTATAGAAACTGGATATTTTACTTATAAGGGAATTTTCTTCCCTGTATTTTGGTCTTTATTAGTTA TTATTGCATTTGCTATATTATTTAAACCTATTAAAAGAGTTAAATTTCTATTTATGCTAAATTTAGTAATTACTCTATTT ATAATAGCAGACCTAAACTATTTTAGATACTTTAAGGATGTACTATCTATTCCTGTTATTTTAAATAGTTTTCAATTAGG GGCTGTTAAATCTAGTGTTGGTAGTTTAATTAAATTATCGGATTTTTTATATTTTGCTGATTTAATATTATTTAAATTTA TAATTGATCACTATAAGCATTCAAAATTTGATAGAGTTATACTAAGTAAGCAACTTAAGTTTTCAACCTTTTTAGCAATA TTTATATTAGCATCTAGTATGGAAGGATATCATTTTTATAAATTATCTAAAGAACAACCTAAATTATTAAGTACAATGTA TAACAAGGTTTACATAGCAAAAAAATTAGGTAATGTGAATTATCATTATTTAGATTGTTTTAATTCTTTAACTAATGGAA TTGCTAAAAAAACTCCTATTCCTAAACAAAAAGAGGAAAAGGTTAAAGCTTATTTGCAAACTAATATTACGGAAAATGCA ACTCCAAAATTAAAAGGTATTGGAGAAAATAAGAATTTAATAATTATACAAGTGGAAGCTTTACAATCCTTTGCCATAAA TAAAACTATAAATGGAAAAGAAATAACTCCTAATTTAAATAAATGGATAAAGAAAAGTGCAAATTTCCCAAATTACTTTT ATCAAACTGCTTCAGGTGGTACTTCTGATGCAGAATTTTTAAGCAATAACTCCCTTTATCCAACAGCTTCAGGGTCTGTT ACCTATTTATATGCAGGAAATGAATTTAATGCTTTACCTGAAGCATTAAAAGAAAAAGGATACAGCACAGCTGGTTTCCA TGGGTTTAGAGAAAGCTTTTGGAATAGAAATATAATGTATCCTAAATATGGATTTGATAAGTTCTTTGGTGAAAAAAGCT ATAATGTAGATGAAAAAATCGGTTTAGGATTAAGTGATAAATCCTTTTTAAATCAAAGCTTAGATAAAATGAAAGAATTA AAAGAACCTTATTTTTCTTTTATAGTTACTTTAACTAGTCATTTTCCTTATGAAGCTGTAGATAAATATGGTGACTTTCC TGTAGGAGAATTGGAAAATACCCTAGTTGGAAACTATTTGAAATCTATACATTACACTGATGAACAACTTGGATTATTTT TAGATAAATTACAACAAGAAAAAATATTGGACAAGTCTATATTGGCAGTGTATGGAGATCATTATGCTATACCTAAAGAA CATGAAAAAGATTTGGCAAAACTTTTAGGTAAAGAAGGTTTTACAGATTTGGAATGGATGGAGCTTCAAAAGGTACCTAT GTTTATACATTTTCCTAAGGATGCTCATAAGGGCAATTACAACATATATGGAGGGCAAATAGATTTATATCCTACTTTGG CAAATATGTTTAACCTTCCAATGCAAAATATGTTAGGAAAAGATTTATTTAATAGTAAAAATGGTAAGGTAATTTTTAGA AATGGATCTTTTTCAGATGGTAAGTCATTTTATATATCGCCATTAAATAGCTATTTTAATATATATAATGGCGAAAAAAT AGAAGAAGATGATAATTTAAAAAACTTAAAGGAAAAAACTATTAACGAATTAGAGTATTCGGATTTAATACTTAAGCACA ATTTGCTTAAAAAATTCAAAAATAAATAG
Upstream 100 bases:
>100_bases CGTTGTTTTTGCTTTATTAACATAAATTTATAATAAAATACATAAATTTAATTTATAGTAGAGTTAAAGTTCAAAACTGC TTTTTTTTGGGGGGAACAAA
Downstream 100 bases:
>100_bases CCACCAGCTTAGCTGGTGGTTTTCTTTCTTATTAGCTTTTAGATTTTTCTAATTTTACATCTTAAACATTTCAAATAACA TTTTGCAAGCTACAGCTAAA
Product: alkaline phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MKKTLNYIFKNFIDIIAFIVFLTIKLLIYGKTIETGYFTYKGIFFPVFWSLLVIIAFAILFKPIKRVKFLFMLNLVITLF IIADLNYFRYFKDVLSIPVILNSFQLGAVKSSVGSLIKLSDFLYFADLILFKFIIDHYKHSKFDRVILSKQLKFSTFLAI FILASSMEGYHFYKLSKEQPKLLSTMYNKVYIAKKLGNVNYHYLDCFNSLTNGIAKKTPIPKQKEEKVKAYLQTNITENA TPKLKGIGENKNLIIIQVEALQSFAINKTINGKEITPNLNKWIKKSANFPNYFYQTASGGTSDAEFLSNNSLYPTASGSV TYLYAGNEFNALPEALKEKGYSTAGFHGFRESFWNRNIMYPKYGFDKFFGEKSYNVDEKIGLGLSDKSFLNQSLDKMKEL KEPYFSFIVTLTSHFPYEAVDKYGDFPVGELENTLVGNYLKSIHYTDEQLGLFLDKLQQEKILDKSILAVYGDHYAIPKE HEKDLAKLLGKEGFTDLEWMELQKVPMFIHFPKDAHKGNYNIYGGQIDLYPTLANMFNLPMQNMLGKDLFNSKNGKVIFR NGSFSDGKSFYISPLNSYFNIYNGEKIEEDDNLKNLKEKTINELEYSDLILKHNLLKKFKNK
Sequences:
>Translated_622_residues MKKTLNYIFKNFIDIIAFIVFLTIKLLIYGKTIETGYFTYKGIFFPVFWSLLVIIAFAILFKPIKRVKFLFMLNLVITLF IIADLNYFRYFKDVLSIPVILNSFQLGAVKSSVGSLIKLSDFLYFADLILFKFIIDHYKHSKFDRVILSKQLKFSTFLAI FILASSMEGYHFYKLSKEQPKLLSTMYNKVYIAKKLGNVNYHYLDCFNSLTNGIAKKTPIPKQKEEKVKAYLQTNITENA TPKLKGIGENKNLIIIQVEALQSFAINKTINGKEITPNLNKWIKKSANFPNYFYQTASGGTSDAEFLSNNSLYPTASGSV TYLYAGNEFNALPEALKEKGYSTAGFHGFRESFWNRNIMYPKYGFDKFFGEKSYNVDEKIGLGLSDKSFLNQSLDKMKEL KEPYFSFIVTLTSHFPYEAVDKYGDFPVGELENTLVGNYLKSIHYTDEQLGLFLDKLQQEKILDKSILAVYGDHYAIPKE HEKDLAKLLGKEGFTDLEWMELQKVPMFIHFPKDAHKGNYNIYGGQIDLYPTLANMFNLPMQNMLGKDLFNSKNGKVIFR NGSFSDGKSFYISPLNSYFNIYNGEKIEEDDNLKNLKEKTINELEYSDLILKHNLLKKFKNK >Mature_622_residues MKKTLNYIFKNFIDIIAFIVFLTIKLLIYGKTIETGYFTYKGIFFPVFWSLLVIIAFAILFKPIKRVKFLFMLNLVITLF IIADLNYFRYFKDVLSIPVILNSFQLGAVKSSVGSLIKLSDFLYFADLILFKFIIDHYKHSKFDRVILSKQLKFSTFLAI FILASSMEGYHFYKLSKEQPKLLSTMYNKVYIAKKLGNVNYHYLDCFNSLTNGIAKKTPIPKQKEEKVKAYLQTNITENA TPKLKGIGENKNLIIIQVEALQSFAINKTINGKEITPNLNKWIKKSANFPNYFYQTASGGTSDAEFLSNNSLYPTASGSV TYLYAGNEFNALPEALKEKGYSTAGFHGFRESFWNRNIMYPKYGFDKFFGEKSYNVDEKIGLGLSDKSFLNQSLDKMKEL KEPYFSFIVTLTSHFPYEAVDKYGDFPVGELENTLVGNYLKSIHYTDEQLGLFLDKLQQEKILDKSILAVYGDHYAIPKE HEKDLAKLLGKEGFTDLEWMELQKVPMFIHFPKDAHKGNYNIYGGQIDLYPTLANMFNLPMQNMLGKDLFNSKNGKVIFR NGSFSDGKSFYISPLNSYFNIYNGEKIEEDDNLKNLKEKTINELEYSDLILKHNLLKKFKNK
Specific function: Unknown
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Processed uncharacterized protein yqgS:Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LTA synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012160 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 71797; Mature: 71797
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLNYIFKNFIDIIAFIVFLTIKLLIYGKTIETGYFTYKGIFFPVFWSLLVIIAFAIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHH FKPIKRVKFLFMLNLVITLFIIADLNYFRYFKDVLSIPVILNSFQLGAVKSSVGSLIKLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH DFLYFADLILFKFIIDHYKHSKFDRVILSKQLKFSTFLAIFILASSMEGYHFYKLSKEQP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH KLLSTMYNKVYIAKKLGNVNYHYLDCFNSLTNGIAKKTPIPKQKEEKVKAYLQTNITENA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC TPKLKGIGENKNLIIIQVEALQSFAINKTINGKEITPNLNKWIKKSANFPNYFYQTASGG CCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHEECCCCC TSDAEFLSNNSLYPTASGSVTYLYAGNEFNALPEALKEKGYSTAGFHGFRESFWNRNIMY CCCHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC PKYGFDKFFGEKSYNVDEKIGLGLSDKSFLNQSLDKMKELKEPYFSFIVTLTSHFPYEAV CCCCCHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH DKYGDFPVGELENTLVGNYLKSIHYTDEQLGLFLDKLQQEKILDKSILAVYGDHYAIPKE HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH HEKDLAKLLGKEGFTDLEWMELQKVPMFIHFPKDAHKGNYNIYGGQIDLYPTLANMFNLP HHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCEEECCEEEEHHHHHHHHCCC MQNMLGKDLFNSKNGKVIFRNGSFSDGKSFYISPLNSYFNIYNGEKIEEDDNLKNLKEKT HHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHH INELEYSDLILKHNLLKKFKNK HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKTLNYIFKNFIDIIAFIVFLTIKLLIYGKTIETGYFTYKGIFFPVFWSLLVIIAFAIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHH FKPIKRVKFLFMLNLVITLFIIADLNYFRYFKDVLSIPVILNSFQLGAVKSSVGSLIKLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH DFLYFADLILFKFIIDHYKHSKFDRVILSKQLKFSTFLAIFILASSMEGYHFYKLSKEQP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH KLLSTMYNKVYIAKKLGNVNYHYLDCFNSLTNGIAKKTPIPKQKEEKVKAYLQTNITENA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC TPKLKGIGENKNLIIIQVEALQSFAINKTINGKEITPNLNKWIKKSANFPNYFYQTASGG CCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHEECCCCC TSDAEFLSNNSLYPTASGSVTYLYAGNEFNALPEALKEKGYSTAGFHGFRESFWNRNIMY CCCHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC PKYGFDKFFGEKSYNVDEKIGLGLSDKSFLNQSLDKMKELKEPYFSFIVTLTSHFPYEAV CCCCCHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH DKYGDFPVGELENTLVGNYLKSIHYTDEQLGLFLDKLQQEKILDKSILAVYGDHYAIPKE HHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH HEKDLAKLLGKEGFTDLEWMELQKVPMFIHFPKDAHKGNYNIYGGQIDLYPTLANMFNLP HHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCEEECCEEEEHHHHHHHHCCC MQNMLGKDLFNSKNGKVIFRNGSFSDGKSFYISPLNSYFNIYNGEKIEEDDNLKNLKEKT HHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHH INELEYSDLILKHNLLKKFKNK HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]