| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is insK [H]
Identifier: 28211563
GI number: 28211563
Start: 2057830
End: 2058159
Strand: Direct
Name: insK [H]
Synonym: CTC01934
Alternate gene names: 28211563
Gene position: 2057830-2058159 (Clockwise)
Preceding gene: 28211556
Following gene: 28211571
Centisome position: 73.51
GC content: 27.58
Gene sequence:
>330_bases ATGAGCACTAATATAAATTTAACAAAAGTTGAAATATTCCACACTGACAGGGGTAATGAATTTAAAAATAAGGTTATAGA TGAAGTTCTAAAAGTTTTTGAAATAAAACGTTCCTTAAGTAAAAAAGGTTATCCATACGATACTGCAGTTGCTGAAGCTG GATACAAAATTATAAAAACAGAATTCGTATTTAATAGAATTTTTAAAAATTTAGAAGAACTAAAAAGAGAGTTGAAAAAT TACGTATTGTGGTATAACTATAGACGTATTCTTAGTGCTCTTAATTATATGGCACCAATAGAATATCGTCTAGCAAAAGT GACCGAATAA
Upstream 100 bases:
>100_bases ATGGCATTATATATGTTTATTAATTAACCTCTTTAATAGAGAAATCGTAGGTTATTCAGCAGATCCTAAAAAGGATGCTG AATTAGTTTATGAAGCATTT
Downstream 100 bases:
>100_bases TATTTATATTAAAAAGCGTTGACAATCCAAGTCAAGCTGTTGCTGATAATGTTTGCTTATCAAAAGATGATGCTATAAAT ATTATTCTTTGTTTAGAATT
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSTNINLTKVEIFHTDRGNEFKNKVIDEVLKVFEIKRSLSKKGYPYDTAVAEAGYKIIKTEFVFNRIFKNLEELKRELKN YVLWYNYRRILSALNYMAPIEYRLAKVTE
Sequences:
>Translated_109_residues MSTNINLTKVEIFHTDRGNEFKNKVIDEVLKVFEIKRSLSKKGYPYDTAVAEAGYKIIKTEFVFNRIFKNLEELKRELKN YVLWYNYRRILSALNYMAPIEYRLAKVTE >Mature_108_residues STNINLTKVEIFHTDRGNEFKNKVIDEVLKVFEIKRSLSKKGYPYDTAVAEAGYKIIKTEFVFNRIFKNLEELKRELKNY VLWYNYRRILSALNYMAPIEYRLAKVTE
Specific function: Involved in the transposition of the insertion sequence IS150 [H]
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1789981, Length=99, Percent_Identity=35.3535353535354, Blast_Score=67, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 13034; Mature: 12903
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNINLTKVEIFHTDRGNEFKNKVIDEVLKVFEIKRSLSKKGYPYDTAVAEAGYKIIKT CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHH EFVFNRIFKNLEELKRELKNYVLWYNYRRILSALNYMAPIEYRLAKVTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure STNINLTKVEIFHTDRGNEFKNKVIDEVLKVFEIKRSLSKKGYPYDTAVAEAGYKIIKT CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHH EFVFNRIFKNLEELKRELKNYVLWYNYRRILSALNYMAPIEYRLAKVTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2841644; 2541046; 8041620; 9278503 [H]