| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is yeiH [C]
Identifier: 28211482
GI number: 28211482
Start: 1957114
End: 1958151
Strand: Direct
Name: yeiH [C]
Synonym: CTC01844
Alternate gene names: 28211482
Gene position: 1957114-1958151 (Clockwise)
Preceding gene: 28211469
Following gene: 28211485
Centisome position: 69.92
GC content: 30.64
Gene sequence:
>1038_bases ATGTTATTTATTAAAAAATATTCAGTTGGAATACTATTTACAGCAGTACTTGCAGTTATATCAGGTTTCATTAGTAACCT AATTCCCTATAGACTTATAGGTGCAGGAGTTTTTGCACTACTCATTGGTATGTTTTTAAATCCTATAGTATCAAAATATA CAGTACTAAATAAAGGTCTTAACTTTACATCAAAAAAGATATTACGTCTTGCCATTATACTTATGGGAATTACTTTGAGT TTTTCTCAAGTTTTAGAAGTAGGTAAATATTCCTTGATAGTTATGGTATTTACTCTTATAACAGCTTTTGGTGGGGGATA CTTACTTGGTAAGCTCTTTAAAATGGATTGGAAACTATCAGGTCTTATATCTGCTGGAACTGGTATATGTGGTGGTTCTG CCATAGCTGCTATTTCACCAGTTATTGATGCAGAGGATAGTGATATTGCCTATGCTATATCTGCAACGTTTATATTTGAT GTAATTATGGTAATTCTTTTTCCAATAGCAGGTAAATATTTTAATATGACTGATTTAGGTTATGGACTTTGGGCTGGAAC CGCAGTAAATGATACATCATCAGTAGTTGCCGCAGGTTATGCCTTTTCTGATGTTGCTGGTAATTTCTCCGTAATAGTTA AGCTTACACGAACCTTATCTATTGTTCCTGTTGTGCTTATATTCTCATATATAAATGAACGACTTATAAGAAAAACTAAA AATGAAAATTTTAAAGGAAATGAATCTACTTATCATAAAGATAAAATTAATATATCAAAAATTTTTCCCTGGTTTATATT ATTATTTCTTGTTATGGTTGCCATTAAAAGCACTGGAATAATTCCTAACACAATAAGCCATTTTATTTCTAAATTAAGTA AATTTTTAATGGTAATGTCACTGGGAGCAATAGGTCTTAAAACTAATTTTAAAAGCCTTGCAAAATCAGGTTTTGCTCCA GCGGTACATGGATTTATTATTTCTTTATTGGTTGTTGTAGTTTCTTTTTTAGTGCAAATGACTTTGGGACAAGTATAA
Upstream 100 bases:
>100_bases AATATAATTTTTTCTTATAATTACATAATGATTTGCAATTGGATTTTATAATTTTATGGTGATAAAATCAAAATGAAGGT TAATTAAGGAGGAATAATTT
Downstream 100 bases:
>100_bases ATATAAAAAATAAACTGTAACCAGAAAATAGGTTTACAGTTTATTTTTATATTTATTTAAAACTTTTTAATGGTATTTTA AATTCTTTTATCCCCTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MLFIKKYSVGILFTAVLAVISGFISNLIPYRLIGAGVFALLIGMFLNPIVSKYTVLNKGLNFTSKKILRLAIILMGITLS FSQVLEVGKYSLIVMVFTLITAFGGGYLLGKLFKMDWKLSGLISAGTGICGGSAIAAISPVIDAEDSDIAYAISATFIFD VIMVILFPIAGKYFNMTDLGYGLWAGTAVNDTSSVVAAGYAFSDVAGNFSVIVKLTRTLSIVPVVLIFSYINERLIRKTK NENFKGNESTYHKDKINISKIFPWFILLFLVMVAIKSTGIIPNTISHFISKLSKFLMVMSLGAIGLKTNFKSLAKSGFAP AVHGFIISLLVVVVSFLVQMTLGQV
Sequences:
>Translated_345_residues MLFIKKYSVGILFTAVLAVISGFISNLIPYRLIGAGVFALLIGMFLNPIVSKYTVLNKGLNFTSKKILRLAIILMGITLS FSQVLEVGKYSLIVMVFTLITAFGGGYLLGKLFKMDWKLSGLISAGTGICGGSAIAAISPVIDAEDSDIAYAISATFIFD VIMVILFPIAGKYFNMTDLGYGLWAGTAVNDTSSVVAAGYAFSDVAGNFSVIVKLTRTLSIVPVVLIFSYINERLIRKTK NENFKGNESTYHKDKINISKIFPWFILLFLVMVAIKSTGIIPNTISHFISKLSKFLMVMSLGAIGLKTNFKSLAKSGFAP AVHGFIISLLVVVVSFLVQMTLGQV >Mature_345_residues MLFIKKYSVGILFTAVLAVISGFISNLIPYRLIGAGVFALLIGMFLNPIVSKYTVLNKGLNFTSKKILRLAIILMGITLS FSQVLEVGKYSLIVMVFTLITAFGGGYLLGKLFKMDWKLSGLISAGTGICGGSAIAAISPVIDAEDSDIAYAISATFIFD VIMVILFPIAGKYFNMTDLGYGLWAGTAVNDTSSVVAAGYAFSDVAGNFSVIVKLTRTLSIVPVVLIFSYINERLIRKTK NENFKGNESTYHKDKINISKIFPWFILLFLVMVAIKSTGIIPNTISHFISKLSKFLMVMSLGAIGLKTNFKSLAKSGFAP AVHGFIISLLVVVVSFLVQMTLGQV
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family
Homologues:
Organism=Escherichia coli, GI1788482, Length=298, Percent_Identity=33.2214765100671, Blast_Score=140, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1844_CLOTE (Q893H9)
Other databases:
- EMBL: AE015927 - RefSeq: NP_782426.1 - ProteinModelPortal: Q893H9 - GeneID: 1060995 - GenomeReviews: AE015927_GR - KEGG: ctc:CTC01844 - NMPDR: fig|212717.1.peg.1648 - HOGENOM: HBG669767 - OMA: CETIALA - PhylomeDB: Q893H9 - ProtClustDB: CLSK912234 - BioCyc: CTET212717:CTC_01844-MONOMER - InterPro: IPR018383
Pfam domain/function: PF03601 Cons_hypoth698
EC number: NA
Molecular weight: Translated: 37345; Mature: 37345
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe095164)-; HASH(0xe972e34)-; HASH(0xf2fbfd4)-; HASH(0xcc7c51c)-; HASH(0xeedde1c)-; HASH(0xd1650c4)-; HASH(0xf23f154)-; HASH(0xf1ef8b8)-; HASH(0xded6f38)-; HASH(0xdcdbdb0)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFIKKYSVGILFTAVLAVISGFISNLIPYRLIGAGVFALLIGMFLNPIVSKYTVLNKGL CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NFTSKKILRLAIILMGITLSFSQVLEVGKYSLIVMVFTLITAFGGGYLLGKLFKMDWKLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GLISAGTGICGGSAIAAISPVIDAEDSDIAYAISATFIFDVIMVILFPIAGKYFNMTDLG HHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC YGLWAGTAVNDTSSVVAAGYAFSDVAGNFSVIVKLTRTLSIVPVVLIFSYINERLIRKTK CHHHCCCCCCCCHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NENFKGNESTYHKDKINISKIFPWFILLFLVMVAIKSTGIIPNTISHFISKLSKFLMVMS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LGAIGLKTNFKSLAKSGFAPAVHGFIISLLVVVVSFLVQMTLGQV HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MLFIKKYSVGILFTAVLAVISGFISNLIPYRLIGAGVFALLIGMFLNPIVSKYTVLNKGL CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NFTSKKILRLAIILMGITLSFSQVLEVGKYSLIVMVFTLITAFGGGYLLGKLFKMDWKLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GLISAGTGICGGSAIAAISPVIDAEDSDIAYAISATFIFDVIMVILFPIAGKYFNMTDLG HHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC YGLWAGTAVNDTSSVVAAGYAFSDVAGNFSVIVKLTRTLSIVPVVLIFSYINERLIRKTK CHHHCCCCCCCCHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NENFKGNESTYHKDKINISKIFPWFILLFLVMVAIKSTGIIPNTISHFISKLSKFLMVMS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LGAIGLKTNFKSLAKSGFAPAVHGFIISLLVVVVSFLVQMTLGQV HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12552129