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The map label for this gene is yonR [H]

Identifier: 28210633

GI number: 28210633

Start: 979108

End: 979488

Strand: Direct

Name: yonR [H]

Synonym: CTC00922

Alternate gene names: 28210633

Gene position: 979108-979488 (Clockwise)

Preceding gene: 28210632

Following gene: 28210634

Centisome position: 34.98

GC content: 29.13

Gene sequence:

>381_bases
ATGGAAATATCTGAAAGATTACAGCAACTTAGAAAGCTAGCTAATTATTCACAAGAGCAATTGGCGGACATGCTCGGTGT
ATCTAGACAGGCAATTTCAAAATGGGAAAGTGGACAATCTAATCCTGATATAAGTAATGTTATAAAATTAAGTGGAATTT
ATAATGTGAGTACTGACTATATTTTAATTGGCAAAGAACCTAATAGTGAATTAACTGAAAACAAAATGGAAACTAAATGT
AAAGTTGAGAAGAAAACATATATCCCTATATCTAAAAAGGCATTATCAATAATAGCAATAATAGGATCAACTGCAGTTAT
TACTATTATATTTATTGCTGCATTAACTGCTATAGCTTTTTTTATTAAGAGAAGAAAATGA

Upstream 100 bases:

>100_bases
CCATAAAGTGATATTCAGATTTAGCAGGAGATTTTCCCTAACTAAAAAATTATATGAAGAGAAATTATAAGGCGGTTTTC
TTAAAAAGGAGGCAAGAGGA

Downstream 100 bases:

>100_bases
ACATGTAGTGAGGGACAGGTAACAATTTTTAAACTTTTAAATTAGATCACTATCTCATTTGTATACAAAGTTTTGGATGA
AAATTCAGATTATATGCATT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MEISERLQQLRKLANYSQEQLADMLGVSRQAISKWESGQSNPDISNVIKLSGIYNVSTDYILIGKEPNSELTENKMETKC
KVEKKTYIPISKKALSIIAIIGSTAVITIIFIAALTAIAFFIKRRK

Sequences:

>Translated_126_residues
MEISERLQQLRKLANYSQEQLADMLGVSRQAISKWESGQSNPDISNVIKLSGIYNVSTDYILIGKEPNSELTENKMETKC
KVEKKTYIPISKKALSIIAIIGSTAVITIIFIAALTAIAFFIKRRK
>Mature_126_residues
MEISERLQQLRKLANYSQEQLADMLGVSRQAISKWESGQSNPDISNVIKLSGIYNVSTDYILIGKEPNSELTENKMETKC
KVEKKTYIPISKKALSIIAIIGSTAVITIIFIAALTAIAFFIKRRK

Specific function: This Protein Is A Repressor Of Division Inhibition Gene Dicb. [C]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 14108; Mature: 14108

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISERLQQLRKLANYSQEQLADMLGVSRQAISKWESGQSNPDISNVIKLSGIYNVSTDY
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEECCCCE
ILIGKEPNSELTENKMETKCKVEKKTYIPISKKALSIIAIIGSTAVITIIFIAALTAIAF
EEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIKRRK
HHHCCC
>Mature Secondary Structure
MEISERLQQLRKLANYSQEQLADMLGVSRQAISKWESGQSNPDISNVIKLSGIYNVSTDY
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEECCCCE
ILIGKEPNSELTENKMETKCKVEKKTYIPISKKALSIIAIIGSTAVITIIFIAALTAIAF
EEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIKRRK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]