Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210632

Identifier: 28210632

GI number: 28210632

Start: 978387

End: 979013

Strand: Direct

Name: 28210632

Synonym: CTC00921

Alternate gene names: NA

Gene position: 978387-979013 (Clockwise)

Preceding gene: 28210631

Following gene: 28210633

Centisome position: 34.95

GC content: 28.07

Gene sequence:

>627_bases
ATGAAACAGATAAAAATTTTTTTGATGATGTTTATTGTAGTGTTTTCAACTTTTCTTATGGCTTGTGCTGGGCAAAAAGA
GAATAAGGATACAAAACAAGTAATGCAAAATACATCTATAGTTCATTCAACAAAAAATATATCACCAATAGATGCAGTAG
AAGCTACTTTTAATGCTTTGACTTCATTGAATACAAGAGAATTTAATGAATATATTAAATATGTAGATACTATAAGAAAT
GGTATTGTGTTTAAGGATAATGTTATTTTTGGGGATAACCTTGATGGTGAAAGTAAAGACTACATAGAAAGTATTGTATC
AAAACTTTCTTATAAAATCATTCATAGTGAAGAAAAGAAAAATACTGCAACAATAAAAGTACAGATTACCAATCGTGATT
TATCAGATATAAATAGGCGACTTGAACAGGAGACCTTTAAAGAAGATCATGGAGATGAAAACAATTTGCTTATAAGTTTA
ATAAGAAGTACGGATAAAACAAAGAAATATGATGTAACACTTTTACTTGAGAAAAGTGATAAGGGATGGAAAATTAAAAT
GACTAAAGAATTTGCCAAAGCTATCTGCGGTGATATGCCAAGTTTTATATATAATCTACTGCCATAA

Upstream 100 bases:

>100_bases
CAACTGCAGTTATTACCATTTTATTTATTATTGAATTAACTTCTATAGCTTTTTTTATTAAAGGAAGGTCAATGTAAAGA
TGAAAGGTATGATATAAATA

Downstream 100 bases:

>100_bases
AGTGATATTCAGATTTAGCAGGAGATTTTCCCTAACTAAAAAATTATATGAAGAGAAATTATAAGGCGGTTTTCTTAAAA
AGGAGGCAAGAGGAATGGAA

Product: membrane-associated protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKQIKIFLMMFIVVFSTFLMACAGQKENKDTKQVMQNTSIVHSTKNISPIDAVEATFNALTSLNTREFNEYIKYVDTIRN
GIVFKDNVIFGDNLDGESKDYIESIVSKLSYKIIHSEEKKNTATIKVQITNRDLSDINRRLEQETFKEDHGDENNLLISL
IRSTDKTKKYDVTLLLEKSDKGWKIKMTKEFAKAICGDMPSFIYNLLP

Sequences:

>Translated_208_residues
MKQIKIFLMMFIVVFSTFLMACAGQKENKDTKQVMQNTSIVHSTKNISPIDAVEATFNALTSLNTREFNEYIKYVDTIRN
GIVFKDNVIFGDNLDGESKDYIESIVSKLSYKIIHSEEKKNTATIKVQITNRDLSDINRRLEQETFKEDHGDENNLLISL
IRSTDKTKKYDVTLLLEKSDKGWKIKMTKEFAKAICGDMPSFIYNLLP
>Mature_208_residues
MKQIKIFLMMFIVVFSTFLMACAGQKENKDTKQVMQNTSIVHSTKNISPIDAVEATFNALTSLNTREFNEYIKYVDTIRN
GIVFKDNVIFGDNLDGESKDYIESIVSKLSYKIIHSEEKKNTATIKVQITNRDLSDINRRLEQETFKEDHGDENNLLISL
IRSTDKTKKYDVTLLLEKSDKGWKIKMTKEFAKAICGDMPSFIYNLLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23940; Mature: 23940

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIKIFLMMFIVVFSTFLMACAGQKENKDTKQVMQNTSIVHSTKNISPIDAVEATFNAL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
TSLNTREFNEYIKYVDTIRNGIVFKDNVIFGDNLDGESKDYIESIVSKLSYKIIHSEEKK
HCCCHHHHHHHHHHHHHHHCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
NTATIKVQITNRDLSDINRRLEQETFKEDHGDENNLLISLIRSTDKTKKYDVTLLLEKSD
CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHCCCCCEEEEEEEEEECC
KGWKIKMTKEFAKAICGDMPSFIYNLLP
CCCEEEEHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MKQIKIFLMMFIVVFSTFLMACAGQKENKDTKQVMQNTSIVHSTKNISPIDAVEATFNAL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
TSLNTREFNEYIKYVDTIRNGIVFKDNVIFGDNLDGESKDYIESIVSKLSYKIIHSEEKK
HCCCHHHHHHHHHHHHHHHCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
NTATIKVQITNRDLSDINRRLEQETFKEDHGDENNLLISLIRSTDKTKKYDVTLLLEKSD
CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHCCCCCEEEEEEEEEECC
KGWKIKMTKEFAKAICGDMPSFIYNLLP
CCCEEEEHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA