| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210531
Identifier: 28210531
GI number: 28210531
Start: 861354
End: 862046
Strand: Direct
Name: 28210531
Synonym: CTC00814
Alternate gene names: NA
Gene position: 861354-862046 (Clockwise)
Preceding gene: 28210529
Following gene: 28210532
Centisome position: 30.77
GC content: 28.14
Gene sequence:
>693_bases ATGAAAGTTTTGATAGGAGAAGAAAAAATAAGAGAATTCACAAAAGAAGTGATTTTACAATTTGGAGAAGAAATTCAATG CATATTACTTACTGGCAGCTATGCTAGAGGTGAAGTTTGTGAAAGTAGCGATATAGATATGTGGTTATTCTTTAAAGAAA TAAGTTTTGATATATTAAAAACTATAGCCTATATATTAAAAGACCTTCCTAGAACACCTAAACTGACCCCTAAATGTACA ACCTTTCAAGAAAGCCTAAATAAACATTTTGCTAAGGAATATAATCCATTACAGTATAGAACAGATGGTATTGTATTATA TGGTAAAATTCAACTTCCATACCCCAAAAAAGAGGAATTCATAGAAGAAAGTAAATATTTATCTAACTACGTTATCATGG GAATAAGACATTATATAGCAATTGGAGAAGATGAAGAAAAATTATTGAAAAGAAAAATACAAAGAAGGATTTTAAAACCT TTAATGTGGGCTTTCAGATATAAATATGCAGGAAAATATGGTGAGTATCATAAAAAATTAGATAAATTAAGATTGGTTTG TAATAAGGATGAAAAAGTACTTATTGATATATATAAAACTGCTTTAAGGGGAGATTTAAAAGGGTATGAAGGCAGGGTAG ATTATATATTTACATTGTGCTATAGGGTTTGTAGTAATATCCTAAATTGGTAA
Upstream 100 bases:
>100_bases TACTGGTTAAATATTAAAATTAATTTATAAAACTATTAAGTTTTAATAAATTTTACCTTTCTAGATTCATATAATAGTTA GAGATTAATTAAAGAAAGGT
Downstream 100 bases:
>100_bases TAAAATGTAATATTAATTTATTTACAAAATATATATAGAATAGGGAAAAAACCTTTAATATAATCTGATTTTTAACAAAT ATTTGGAGGGGAACAGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKVLIGEEKIREFTKEVILQFGEEIQCILLTGSYARGEVCESSDIDMWLFFKEISFDILKTIAYILKDLPRTPKLTPKCT TFQESLNKHFAKEYNPLQYRTDGIVLYGKIQLPYPKKEEFIEESKYLSNYVIMGIRHYIAIGEDEEKLLKRKIQRRILKP LMWAFRYKYAGKYGEYHKKLDKLRLVCNKDEKVLIDIYKTALRGDLKGYEGRVDYIFTLCYRVCSNILNW
Sequences:
>Translated_230_residues MKVLIGEEKIREFTKEVILQFGEEIQCILLTGSYARGEVCESSDIDMWLFFKEISFDILKTIAYILKDLPRTPKLTPKCT TFQESLNKHFAKEYNPLQYRTDGIVLYGKIQLPYPKKEEFIEESKYLSNYVIMGIRHYIAIGEDEEKLLKRKIQRRILKP LMWAFRYKYAGKYGEYHKKLDKLRLVCNKDEKVLIDIYKTALRGDLKGYEGRVDYIFTLCYRVCSNILNW >Mature_230_residues MKVLIGEEKIREFTKEVILQFGEEIQCILLTGSYARGEVCESSDIDMWLFFKEISFDILKTIAYILKDLPRTPKLTPKCT TFQESLNKHFAKEYNPLQYRTDGIVLYGKIQLPYPKKEEFIEESKYLSNYVIMGIRHYIAIGEDEEKLLKRKIQRRILKP LMWAFRYKYAGKYGEYHKKLDKLRLVCNKDEKVLIDIYKTALRGDLKGYEGRVDYIFTLCYRVCSNILNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27363; Mature: 27363
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLIGEEKIREFTKEVILQFGEEIQCILLTGSYARGEVCESSDIDMWLFFKEISFDILK CCEEECHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHH TIAYILKDLPRTPKLTPKCTTFQESLNKHFAKEYNPLQYRTDGIVLYGKIQLPYPKKEEF HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCCHHHH IEESKYLSNYVIMGIRHYIAIGEDEEKLLKRKIQRRILKPLMWAFRYKYAGKYGEYHKKL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DKLRLVCNKDEKVLIDIYKTALRGDLKGYEGRVDYIFTLCYRVCSNILNW HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVLIGEEKIREFTKEVILQFGEEIQCILLTGSYARGEVCESSDIDMWLFFKEISFDILK CCEEECHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHH TIAYILKDLPRTPKLTPKCTTFQESLNKHFAKEYNPLQYRTDGIVLYGKIQLPYPKKEEF HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCCHHHH IEESKYLSNYVIMGIRHYIAIGEDEEKLLKRKIQRRILKPLMWAFRYKYAGKYGEYHKKL HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DKLRLVCNKDEKVLIDIYKTALRGDLKGYEGRVDYIFTLCYRVCSNILNW HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA