Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210531

Identifier: 28210531

GI number: 28210531

Start: 861354

End: 862046

Strand: Direct

Name: 28210531

Synonym: CTC00814

Alternate gene names: NA

Gene position: 861354-862046 (Clockwise)

Preceding gene: 28210529

Following gene: 28210532

Centisome position: 30.77

GC content: 28.14

Gene sequence:

>693_bases
ATGAAAGTTTTGATAGGAGAAGAAAAAATAAGAGAATTCACAAAAGAAGTGATTTTACAATTTGGAGAAGAAATTCAATG
CATATTACTTACTGGCAGCTATGCTAGAGGTGAAGTTTGTGAAAGTAGCGATATAGATATGTGGTTATTCTTTAAAGAAA
TAAGTTTTGATATATTAAAAACTATAGCCTATATATTAAAAGACCTTCCTAGAACACCTAAACTGACCCCTAAATGTACA
ACCTTTCAAGAAAGCCTAAATAAACATTTTGCTAAGGAATATAATCCATTACAGTATAGAACAGATGGTATTGTATTATA
TGGTAAAATTCAACTTCCATACCCCAAAAAAGAGGAATTCATAGAAGAAAGTAAATATTTATCTAACTACGTTATCATGG
GAATAAGACATTATATAGCAATTGGAGAAGATGAAGAAAAATTATTGAAAAGAAAAATACAAAGAAGGATTTTAAAACCT
TTAATGTGGGCTTTCAGATATAAATATGCAGGAAAATATGGTGAGTATCATAAAAAATTAGATAAATTAAGATTGGTTTG
TAATAAGGATGAAAAAGTACTTATTGATATATATAAAACTGCTTTAAGGGGAGATTTAAAAGGGTATGAAGGCAGGGTAG
ATTATATATTTACATTGTGCTATAGGGTTTGTAGTAATATCCTAAATTGGTAA

Upstream 100 bases:

>100_bases
TACTGGTTAAATATTAAAATTAATTTATAAAACTATTAAGTTTTAATAAATTTTACCTTTCTAGATTCATATAATAGTTA
GAGATTAATTAAAGAAAGGT

Downstream 100 bases:

>100_bases
TAAAATGTAATATTAATTTATTTACAAAATATATATAGAATAGGGAAAAAACCTTTAATATAATCTGATTTTTAACAAAT
ATTTGGAGGGGAACAGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKVLIGEEKIREFTKEVILQFGEEIQCILLTGSYARGEVCESSDIDMWLFFKEISFDILKTIAYILKDLPRTPKLTPKCT
TFQESLNKHFAKEYNPLQYRTDGIVLYGKIQLPYPKKEEFIEESKYLSNYVIMGIRHYIAIGEDEEKLLKRKIQRRILKP
LMWAFRYKYAGKYGEYHKKLDKLRLVCNKDEKVLIDIYKTALRGDLKGYEGRVDYIFTLCYRVCSNILNW

Sequences:

>Translated_230_residues
MKVLIGEEKIREFTKEVILQFGEEIQCILLTGSYARGEVCESSDIDMWLFFKEISFDILKTIAYILKDLPRTPKLTPKCT
TFQESLNKHFAKEYNPLQYRTDGIVLYGKIQLPYPKKEEFIEESKYLSNYVIMGIRHYIAIGEDEEKLLKRKIQRRILKP
LMWAFRYKYAGKYGEYHKKLDKLRLVCNKDEKVLIDIYKTALRGDLKGYEGRVDYIFTLCYRVCSNILNW
>Mature_230_residues
MKVLIGEEKIREFTKEVILQFGEEIQCILLTGSYARGEVCESSDIDMWLFFKEISFDILKTIAYILKDLPRTPKLTPKCT
TFQESLNKHFAKEYNPLQYRTDGIVLYGKIQLPYPKKEEFIEESKYLSNYVIMGIRHYIAIGEDEEKLLKRKIQRRILKP
LMWAFRYKYAGKYGEYHKKLDKLRLVCNKDEKVLIDIYKTALRGDLKGYEGRVDYIFTLCYRVCSNILNW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27363; Mature: 27363

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLIGEEKIREFTKEVILQFGEEIQCILLTGSYARGEVCESSDIDMWLFFKEISFDILK
CCEEECHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHH
TIAYILKDLPRTPKLTPKCTTFQESLNKHFAKEYNPLQYRTDGIVLYGKIQLPYPKKEEF
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCCHHHH
IEESKYLSNYVIMGIRHYIAIGEDEEKLLKRKIQRRILKPLMWAFRYKYAGKYGEYHKKL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DKLRLVCNKDEKVLIDIYKTALRGDLKGYEGRVDYIFTLCYRVCSNILNW
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLIGEEKIREFTKEVILQFGEEIQCILLTGSYARGEVCESSDIDMWLFFKEISFDILK
CCEEECHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHH
TIAYILKDLPRTPKLTPKCTTFQESLNKHFAKEYNPLQYRTDGIVLYGKIQLPYPKKEEF
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCCHHHH
IEESKYLSNYVIMGIRHYIAIGEDEEKLLKRKIQRRILKPLMWAFRYKYAGKYGEYHKKL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
DKLRLVCNKDEKVLIDIYKTALRGDLKGYEGRVDYIFTLCYRVCSNILNW
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA