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The map label for this gene is ynbC [C]

Identifier: 28210529

GI number: 28210529

Start: 859128

End: 860060

Strand: Direct

Name: ynbC [C]

Synonym: CTC00812

Alternate gene names: 28210529

Gene position: 859128-860060 (Clockwise)

Preceding gene: 28210528

Following gene: 28210531

Centisome position: 30.69

GC content: 26.9

Gene sequence:

>933_bases
ATGATTGAGAATATGAAAGAAGAATTCTTTTTTTACAGCAAAGATAATACTAGAATATATTGCACTAAATACATTCCTAA
GGATAAGTTAAAAGGAGTAGTTCAAATAATTCATGGCATGGGGGAAAATAGTAGTAGATATGAACATTTAGCTATGAAAT
TTATAGGAAATGGATATGCTGTATATATGCATGATCATAGAGGACATGGTAAAACAGCAGAAGTAAGAGAAAACTTAGGG
CATCTAGGAAATGGAGATGTATTCTTAAAAATGATATATGATATGAAAGAAGTTACTGACATAATAAAAAGTCAATTAGG
AGAAGTGCCTGTATTTTTATTGGGGCATAGTATGGGATCTTTTTTATCCCAAAAATATATTTCGCTTTTTGGTAAGGAGC
TAAAAGGGGTAATACTTATGGGAACAGACGGAAGGAAAGGAAGAATTTTAGATATAGGCATTGCACTTTCTAGAAAAGAA
ATAAAAAAACATGGTAGTAAGCATAAAAGTAAGAAATTAAATAGAATATGTTTTTTAAATTGTCATTTAGCTTTTATTCC
AAATAGAACTAAGTTTGATTGGCTAAGTAGTGATACAGAGGAAGTAGATAAATTTATAGAAGATGATTTTTTAGGATTTT
ATTATGATAATTTATTTTTTTATTACTTTTTTAAAGGATTAAAAGATATACATAAAAAAAGTGTAATGAATAAAATACCA
AAGAATCTTCCAATATATATATGTGGAGGCTCAAAAGACCCTATAGGAAGGAATGGAAAAGGGCTTTTAAATTTATATAA
TATGTATAAAAACATGGGTATCAAAAGTTTAACTTGTAAAATATATGAAAATGGAAGACATGAAATATTAAATGAAAAAA
ATAAAGACAATGTTATGGAAGATATAATAATCTGGATAAATAGGCATGTATAA

Upstream 100 bases:

>100_bases
TTTTGGTAAAATAGCAGGGGAAAATGCAGCCAACGAAAAATAATTTAATTAATATACTATAAAAGCCCTTATTTGAGGGC
TTTTATAGTATATTAAGGAG

Downstream 100 bases:

>100_bases
ATTAGGGCTTATGGAAAAGTAAGCCCTAAAATTTTACTTTATGCAATATTTCATTTCAAGTTTGTATGGATTATAAGAAA
GCTTAGATTTTCTAAGTCCT

Product: putative lysophospholipase L2

Products: glycerophosphocholine; carboxylate

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Fold Family Hydrolase; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Lipase; Hydrolase Alpha/Beta Hydrolase Fold Family; Acylglycerol Lipase; Lysophospholipase Protein; Lysophospholipase-Like Protein; Monoglyceride Lipase; Alpha/Beta Hydrolase Family Protein; S33 Family Lysophospholipase; Carboxylic Ester Hydrolase; Alpha/Beta Fold Family Protein Hydrolase; Aminopeptidase; Hydrolase Alpha/Beta Fold Family Protein; Hydrolase Alpha/Beta Domain-Containing Protein; Lysophospholipase/Monoglyceride Lipase; Alpha/Beta Hydrolase Fold-Domain Containing Protein

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MIENMKEEFFFYSKDNTRIYCTKYIPKDKLKGVVQIIHGMGENSSRYEHLAMKFIGNGYAVYMHDHRGHGKTAEVRENLG
HLGNGDVFLKMIYDMKEVTDIIKSQLGEVPVFLLGHSMGSFLSQKYISLFGKELKGVILMGTDGRKGRILDIGIALSRKE
IKKHGSKHKSKKLNRICFLNCHLAFIPNRTKFDWLSSDTEEVDKFIEDDFLGFYYDNLFFYYFFKGLKDIHKKSVMNKIP
KNLPIYICGGSKDPIGRNGKGLLNLYNMYKNMGIKSLTCKIYENGRHEILNEKNKDNVMEDIIIWINRHV

Sequences:

>Translated_310_residues
MIENMKEEFFFYSKDNTRIYCTKYIPKDKLKGVVQIIHGMGENSSRYEHLAMKFIGNGYAVYMHDHRGHGKTAEVRENLG
HLGNGDVFLKMIYDMKEVTDIIKSQLGEVPVFLLGHSMGSFLSQKYISLFGKELKGVILMGTDGRKGRILDIGIALSRKE
IKKHGSKHKSKKLNRICFLNCHLAFIPNRTKFDWLSSDTEEVDKFIEDDFLGFYYDNLFFYYFFKGLKDIHKKSVMNKIP
KNLPIYICGGSKDPIGRNGKGLLNLYNMYKNMGIKSLTCKIYENGRHEILNEKNKDNVMEDIIIWINRHV
>Mature_310_residues
MIENMKEEFFFYSKDNTRIYCTKYIPKDKLKGVVQIIHGMGENSSRYEHLAMKFIGNGYAVYMHDHRGHGKTAEVRENLG
HLGNGDVFLKMIYDMKEVTDIIKSQLGEVPVFLLGHSMGSFLSQKYISLFGKELKGVILMGTDGRKGRILDIGIALSRKE
IKKHGSKHKSKKLNRICFLNCHLAFIPNRTKFDWLSSDTEEVDKFIEDDFLGFYYDNLFFYYFFKGLKDIHKKSVMNKIP
KNLPIYICGGSKDPIGRNGKGLLNLYNMYKNMGIKSLTCKIYENGRHEILNEKNKDNVMEDIIIWINRHV

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51242953, Length=299, Percent_Identity=25.4180602006689, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI6005786, Length=299, Percent_Identity=25.4180602006689, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.1.5

Molecular weight: Translated: 35981; Mature: 35981

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIENMKEEFFFYSKDNTRIYCTKYIPKDKLKGVVQIIHGMGENSSRYEHLAMKFIGNGYA
CCCCCCHHEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEE
VYMHDHRGHGKTAEVRENLGHLGNGDVFLKMIYDMKEVTDIIKSQLGEVPVFLLGHSMGS
EEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH
FLSQKYISLFGKELKGVILMGTDGRKGRILDIGIALSRKEIKKHGSKHKSKKLNRICFLN
HHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHCCEEEEE
CHLAFIPNRTKFDWLSSDTEEVDKFIEDDFLGFYYDNLFFYYFFKGLKDIHKKSVMNKIP
EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KNLPIYICGGSKDPIGRNGKGLLNLYNMYKNMGIKSLTCKIYENGRHEILNEKNKDNVME
CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHCCCCCHHHHH
DIIIWINRHV
HHHHHHHCCC
>Mature Secondary Structure
MIENMKEEFFFYSKDNTRIYCTKYIPKDKLKGVVQIIHGMGENSSRYEHLAMKFIGNGYA
CCCCCCHHEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEE
VYMHDHRGHGKTAEVRENLGHLGNGDVFLKMIYDMKEVTDIIKSQLGEVPVFLLGHSMGS
EEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH
FLSQKYISLFGKELKGVILMGTDGRKGRILDIGIALSRKEIKKHGSKHKSKKLNRICFLN
HHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHCCEEEEE
CHLAFIPNRTKFDWLSSDTEEVDKFIEDDFLGFYYDNLFFYYFFKGLKDIHKKSVMNKIP
EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KNLPIYICGGSKDPIGRNGKGLLNLYNMYKNMGIKSLTCKIYENGRHEILNEKNKDNVME
CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHCCCCCHHHHH
DIIIWINRHV
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-lysophosphatidylcholine; H2O

Specific reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA