Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210489

Identifier: 28210489

GI number: 28210489

Start: 810742

End: 811866

Strand: Direct

Name: 28210489

Synonym: CTC00771

Alternate gene names: NA

Gene position: 810742-811866 (Clockwise)

Preceding gene: 28210488

Following gene: 28210490

Centisome position: 28.96

GC content: 31.64

Gene sequence:

>1125_bases
TTGATATATAAGGTAATTTATTTACCTTATATATCAAAGAAAAATTTTAAAGGTTCATGGAGGAATCTATATAAAATGAA
CAAAAAAAAGAAGATAATAATAGCTTGTATAGCTATGTTAACTATAGCTGTGGGAGGATTATTTATTAAGAATTATAACA
TGAAGGATCAATCCACAACTTTCACAAGGGTAGTTCAAGATGAAAATAAAAAGAATAATAAAAAAGAGAATAAAAAGGAA
GAGCCTAAGAAAGAAGAAGTCAAAAAGAAAGACCAGGAGAAAAAGAAGGAAGAAGAAGAAAAGAAAAAGGAAGATAATAA
AAAAGAAGAAAAAAAAGAGATAAAACAAAACCCTTTAGTTGAAGCAAAGAAGCCTTCATCAAATTCTTCCATTGATGGAA
GTAAAAAGACAGTTTATATAAGGGTGGAAGGCTATGATAGAACTTTTGTACCGCGAACAAAGATAACTACAGGAGCTTTT
GATTTAAACCCTTATTTAGGTCCAGCAACAGGTTCTTCAGCAACAGCTTCTAAAGGCTGGGGAATGGATAAATTTAAAGA
ACCAACCAATGCCCATGCTATAGTTAAAGCTTTAGAAAGTAACGGATATAAGAAAGAAGTAGGTTACGACTTTCAAGATT
ATGGCTGGGGTCTTTATATAGCTATGATAGGTGGAAATAGAGAGTTTGATTATAGAAGTACTTCAGGATGGATGTACAGA
GTAAACAATGTACTTCCGAATGTAGGATGTCAAGGAACAGCTCTTAAAAATGGAGATGAAATACTATGGTATTTTGGAGC
CTATGGTTTTGATACTTTAGCTACGGAATTAGAGGGGAATACTACCAATGTAAGTACAGGGCAAGATGTAACAGTAACCT
TAAATGGTATAAAAAATGATATAAATACTTGGAAAGAATTTAGAGAACCAGTAAAGGGAGCAACTATATATGCTAATGGA
AATCCTTTAAATATAGATGGTAGCAATATTCTCACAGATGGTGAAGGAAAGGCAACTATAAAATTTGATAAACCAGGTAC
TTATACATTATCAGCAGAAAGAATTAACAATAAGAACTTAAGAGATATAGTAAGACCACGACCATTTACTATAACTGTTA
AATAA

Upstream 100 bases:

>100_bases
AAATTATATGATAGTGAAAATGGCAAATGGATATTGTTAAAATCAAAATTTGATGCAAAGACTAATAGAGTTATTGGACA
AGTAAAATAACTTAATTAAT

Downstream 100 bases:

>100_bases
TAAGATACTTACTATAGTAAAGGGGTTTTTATGAAATGAATAATAAAAAAAAGATAATAATAGCTTGTATAACTATATTA
TCTATGTTTCTTTGTGGGAT

Product: putative surface/cell-adhesion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MIYKVIYLPYISKKNFKGSWRNLYKMNKKKKIIIACIAMLTIAVGGLFIKNYNMKDQSTTFTRVVQDENKKNNKKENKKE
EPKKEEVKKKDQEKKKEEEEKKKEDNKKEEKKEIKQNPLVEAKKPSSNSSIDGSKKTVYIRVEGYDRTFVPRTKITTGAF
DLNPYLGPATGSSATASKGWGMDKFKEPTNAHAIVKALESNGYKKEVGYDFQDYGWGLYIAMIGGNREFDYRSTSGWMYR
VNNVLPNVGCQGTALKNGDEILWYFGAYGFDTLATELEGNTTNVSTGQDVTVTLNGIKNDINTWKEFREPVKGATIYANG
NPLNIDGSNILTDGEGKATIKFDKPGTYTLSAERINNKNLRDIVRPRPFTITVK

Sequences:

>Translated_374_residues
MIYKVIYLPYISKKNFKGSWRNLYKMNKKKKIIIACIAMLTIAVGGLFIKNYNMKDQSTTFTRVVQDENKKNNKKENKKE
EPKKEEVKKKDQEKKKEEEEKKKEDNKKEEKKEIKQNPLVEAKKPSSNSSIDGSKKTVYIRVEGYDRTFVPRTKITTGAF
DLNPYLGPATGSSATASKGWGMDKFKEPTNAHAIVKALESNGYKKEVGYDFQDYGWGLYIAMIGGNREFDYRSTSGWMYR
VNNVLPNVGCQGTALKNGDEILWYFGAYGFDTLATELEGNTTNVSTGQDVTVTLNGIKNDINTWKEFREPVKGATIYANG
NPLNIDGSNILTDGEGKATIKFDKPGTYTLSAERINNKNLRDIVRPRPFTITVK
>Mature_374_residues
MIYKVIYLPYISKKNFKGSWRNLYKMNKKKKIIIACIAMLTIAVGGLFIKNYNMKDQSTTFTRVVQDENKKNNKKENKKE
EPKKEEVKKKDQEKKKEEEEKKKEDNKKEEKKEIKQNPLVEAKKPSSNSSIDGSKKTVYIRVEGYDRTFVPRTKITTGAF
DLNPYLGPATGSSATASKGWGMDKFKEPTNAHAIVKALESNGYKKEVGYDFQDYGWGLYIAMIGGNREFDYRSTSGWMYR
VNNVLPNVGCQGTALKNGDEILWYFGAYGFDTLATELEGNTTNVSTGQDVTVTLNGIKNDINTWKEFREPVKGATIYANG
NPLNIDGSNILTDGEGKATIKFDKPGTYTLSAERINNKNLRDIVRPRPFTITVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42388; Mature: 42388

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYKVIYLPYISKKNFKGSWRNLYKMNKKKKIIIACIAMLTIAVGGLFIKNYNMKDQSTT
CEEEEEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCH
FTRVVQDENKKNNKKENKKEEPKKEEVKKKDQEKKKEEEEKKKEDNKKEEKKEIKQNPLV
HHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
EAKKPSSNSSIDGSKKTVYIRVEGYDRTFVPRTKITTGAFDLNPYLGPATGSSATASKGW
CCCCCCCCCCCCCCCEEEEEEEECCCCEECCCCEEEECEEECCCCCCCCCCCCCCCCCCC
GMDKFKEPTNAHAIVKALESNGYKKEVGYDFQDYGWGLYIAMIGGNREFDYRSTSGWMYR
CCHHHCCCCCHHHHHHHHHCCCCCHHCCCCHHHCCCEEEEEEECCCCCCCCCCCCCEEEE
VNNVLPNVGCQGTALKNGDEILWYFGAYGFDTLATELEGNTTNVSTGQDVTVTLNGIKND
ECCCCCCCCCCCCEECCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHH
INTWKEFREPVKGATIYANGNPLNIDGSNILTDGEGKATIKFDKPGTYTLSAERINNKNL
HHHHHHHHHCCCCEEEEECCCEEEECCCCEEECCCCEEEEEECCCCCEEEEHHHCCCCCH
RDIVRPRPFTITVK
HHHHCCCCEEEEEC
>Mature Secondary Structure
MIYKVIYLPYISKKNFKGSWRNLYKMNKKKKIIIACIAMLTIAVGGLFIKNYNMKDQSTT
CEEEEEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCH
FTRVVQDENKKNNKKENKKEEPKKEEVKKKDQEKKKEEEEKKKEDNKKEEKKEIKQNPLV
HHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
EAKKPSSNSSIDGSKKTVYIRVEGYDRTFVPRTKITTGAFDLNPYLGPATGSSATASKGW
CCCCCCCCCCCCCCCEEEEEEEECCCCEECCCCEEEECEEECCCCCCCCCCCCCCCCCCC
GMDKFKEPTNAHAIVKALESNGYKKEVGYDFQDYGWGLYIAMIGGNREFDYRSTSGWMYR
CCHHHCCCCCHHHHHHHHHCCCCCHHCCCCHHHCCCEEEEEEECCCCCCCCCCCCCEEEE
VNNVLPNVGCQGTALKNGDEILWYFGAYGFDTLATELEGNTTNVSTGQDVTVTLNGIKND
ECCCCCCCCCCCCEECCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHH
INTWKEFREPVKGATIYANGNPLNIDGSNILTDGEGKATIKFDKPGTYTLSAERINNKNL
HHHHHHHHHCCCCEEEEECCCEEEECCCCEEECCCCEEEEEECCCCCEEEEHHHCCCCCH
RDIVRPRPFTITVK
HHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA