Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210487

Identifier: 28210487

GI number: 28210487

Start: 806878

End: 808584

Strand: Direct

Name: 28210487

Synonym: CTC00769

Alternate gene names: NA

Gene position: 806878-808584 (Clockwise)

Preceding gene: 28210486

Following gene: 28210488

Centisome position: 28.82

GC content: 30.52

Gene sequence:

>1707_bases
ATGTTTAAAAAGAAGCAGGTTAAGGGTTTACTCTGCATGCTTATGACTTTTTTAATGGTTTTTACTACTGTAGATACTGG
AATATTAGGTATGAAACAAGTATTCGCAGAAACTATTAAAAAAGAAAGTATACCTACAGAAGTGAAAGAGGATTCAGAAG
AGAAAAAAGATGTAGAAAAAAATAAATCTGTAGATACTGATAAAAAGCAGGAATTAACTGATGATAAATCAAGAAATGAA
AAAATTTACAATGATAAAATAGTACATAAAGCACAAAGTGAGAGTATTGGAACAACCTCTATAAAAATAGTCAATGATCT
TAGTAAAGTTAAAGTTGGAAATAAAGTAGAACTGGAGGTAAAGAACGACAGTAATGTAGTAATTCCTACGGAAAGTTTGT
TATTTACAGTAAGTAATGAGAAATTAGTAAAAGAACAGATAGATAAAAATCTCGCATATATTCTTAAAAATGTAGAGAAT
CCTTCACTTGGAACAGGTAAAGGGGAATGGTCTATTCTTTGTTTAGCAAGAGGGAACTATCCTGTACCTAAAGGTTACTA
TGATAAATATTACAAAAATGTAGTAAAAGAAGTACAAAATGCAAAAGGAAATTTGCATAAAGTAAAGTATACAGAGCATT
CAAGGTTAATTTTAGGACTAGCTTCTATAGGAAGAGATATTAAAAATGTAGGTGGATATAATCAATTAGAAAAACTTGCA
GATTTTAAGACAGTTATTAGGCAAGGTATTAATGGTCCAATATTTGCACTTATAGCTCTTGATACACACAATTATGAAAT
ACCTATAGTAAATAATGTAAAAGTACAAACTACAAGGGATATGCTTGTTCAGTATATTCTAGATAAAGAAATTAAAAAAG
GAAAAGAAAATGCTGGTGGATGGGCATTATATGGTGAAACTCCAGATCCTGATATTACTGCAATGGCTATACAAGGACTT
ACTCCATATTATAAAGGAAATCCTGAAGTGAAAGCAGCTGTAGATAGAGCTATTTCTTGGTTATCAAGTGCACAAAAAGA
TGATGGCGGATATTCAAGCTGGGGATCAATAAATAGTGAAAGTATTGCACAGGTTGTAGTAGCTTTAACAGGACTAGGAA
TAAATCCTCATAAAGATTCAAGATTTATAAAAAAAGGAAATTCAGCTATAGATGCGCTATTAACTTTCGCAGATCCAAAA
GGTGGATTTATGCATGTTAAACCGGGAGGTAATACTAACGGTGGTGCAGCAGCAGGAGTAATAGACGGAATGGCAACTGA
TCAAGGTACATATGCTTTAATTGCATATGATAGATTTGTAAACAGTAAAAATAGACTTTATGATATGACCGATGTAATTG
TTAAAGCAGAAGAATCACATAAACCAGAGAATTTTAAAGCTGAAAGAATAGGAGAAGAAAATTTAAAGAAAAATTCAAGT
GCTCAAGTTAAATTTGACGTAGAAAATATATCAAAAGAAGACGAAGAGGTTGCATTAGCAATAGTTTTATATGATAAAAA
TACTAATGAAATGATAAATTACAGTTATGTTAAAAAGATATTAAAATCAGGAAAAAAGGAAGTATTTGCAGCTGGTTTTA
TAATACCAGAAAAAGGAGACTATTTAGTTAAGGCTATAATTTGCGATGATTTAAATCCAAAAAAGATGAATGTGTTAGCA
GATCCAATTAAAATAGAAGTAGAGTAG

Upstream 100 bases:

>100_bases
TATCAAATTTATAAGTTTTGAAAAAGAGGAGGTAGGTATATTTAGAGATACATAAAAACAATTTATATAATTATATAAAA
TTTAAATAGGAGGTTAGAAA

Downstream 100 bases:

>100_bases
TTAAAACTCAATAAAAAATATTGTAGTATTAAGGGGATTTAATACTACAATATATCTTAAAATAAGGAGAGAAAGATATG
AAAAAGTTTTGGAAAAGTTT

Product: putative surface/cell-adhesion protein

Products: NA

Alternate protein names: Cell Wall Anchor Domain-Containing Protein; S-Layer Domain Protein; N-Acetylmuramoyl-L-Alanine Amidase; LPXTG-Motif Cell Wall Anchor Domain Protein; Copper Amine Oxidase Domain Protein

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MFKKKQVKGLLCMLMTFLMVFTTVDTGILGMKQVFAETIKKESIPTEVKEDSEEKKDVEKNKSVDTDKKQELTDDKSRNE
KIYNDKIVHKAQSESIGTTSIKIVNDLSKVKVGNKVELEVKNDSNVVIPTESLLFTVSNEKLVKEQIDKNLAYILKNVEN
PSLGTGKGEWSILCLARGNYPVPKGYYDKYYKNVVKEVQNAKGNLHKVKYTEHSRLILGLASIGRDIKNVGGYNQLEKLA
DFKTVIRQGINGPIFALIALDTHNYEIPIVNNVKVQTTRDMLVQYILDKEIKKGKENAGGWALYGETPDPDITAMAIQGL
TPYYKGNPEVKAAVDRAISWLSSAQKDDGGYSSWGSINSESIAQVVVALTGLGINPHKDSRFIKKGNSAIDALLTFADPK
GGFMHVKPGGNTNGGAAAGVIDGMATDQGTYALIAYDRFVNSKNRLYDMTDVIVKAEESHKPENFKAERIGEENLKKNSS
AQVKFDVENISKEDEEVALAIVLYDKNTNEMINYSYVKKILKSGKKEVFAAGFIIPEKGDYLVKAIICDDLNPKKMNVLA
DPIKIEVE

Sequences:

>Translated_568_residues
MFKKKQVKGLLCMLMTFLMVFTTVDTGILGMKQVFAETIKKESIPTEVKEDSEEKKDVEKNKSVDTDKKQELTDDKSRNE
KIYNDKIVHKAQSESIGTTSIKIVNDLSKVKVGNKVELEVKNDSNVVIPTESLLFTVSNEKLVKEQIDKNLAYILKNVEN
PSLGTGKGEWSILCLARGNYPVPKGYYDKYYKNVVKEVQNAKGNLHKVKYTEHSRLILGLASIGRDIKNVGGYNQLEKLA
DFKTVIRQGINGPIFALIALDTHNYEIPIVNNVKVQTTRDMLVQYILDKEIKKGKENAGGWALYGETPDPDITAMAIQGL
TPYYKGNPEVKAAVDRAISWLSSAQKDDGGYSSWGSINSESIAQVVVALTGLGINPHKDSRFIKKGNSAIDALLTFADPK
GGFMHVKPGGNTNGGAAAGVIDGMATDQGTYALIAYDRFVNSKNRLYDMTDVIVKAEESHKPENFKAERIGEENLKKNSS
AQVKFDVENISKEDEEVALAIVLYDKNTNEMINYSYVKKILKSGKKEVFAAGFIIPEKGDYLVKAIICDDLNPKKMNVLA
DPIKIEVE
>Mature_568_residues
MFKKKQVKGLLCMLMTFLMVFTTVDTGILGMKQVFAETIKKESIPTEVKEDSEEKKDVEKNKSVDTDKKQELTDDKSRNE
KIYNDKIVHKAQSESIGTTSIKIVNDLSKVKVGNKVELEVKNDSNVVIPTESLLFTVSNEKLVKEQIDKNLAYILKNVEN
PSLGTGKGEWSILCLARGNYPVPKGYYDKYYKNVVKEVQNAKGNLHKVKYTEHSRLILGLASIGRDIKNVGGYNQLEKLA
DFKTVIRQGINGPIFALIALDTHNYEIPIVNNVKVQTTRDMLVQYILDKEIKKGKENAGGWALYGETPDPDITAMAIQGL
TPYYKGNPEVKAAVDRAISWLSSAQKDDGGYSSWGSINSESIAQVVVALTGLGINPHKDSRFIKKGNSAIDALLTFADPK
GGFMHVKPGGNTNGGAAAGVIDGMATDQGTYALIAYDRFVNSKNRLYDMTDVIVKAEESHKPENFKAERIGEENLKKNSS
AQVKFDVENISKEDEEVALAIVLYDKNTNEMINYSYVKKILKSGKKEVFAAGFIIPEKGDYLVKAIICDDLNPKKMNVLA
DPIKIEVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63014; Mature: 63014

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKKQVKGLLCMLMTFLMVFTTVDTGILGMKQVFAETIKKESIPTEVKEDSEEKKDVEK
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHH
NKSVDTDKKQELTDDKSRNEKIYNDKIVHKAQSESIGTTSIKIVNDLSKVKVGNKVELEV
CCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCEEEEEE
KNDSNVVIPTESLLFTVSNEKLVKEQIDKNLAYILKNVENPSLGTGKGEWSILCLARGNY
CCCCCEEEECHHEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC
PVPKGYYDKYYKNVVKEVQNAKGNLHKVKYTEHSRLILGLASIGRDIKNVGGYNQLEKLA
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHEEEHHHHHHHHHHCCCHHHHHHHH
DFKTVIRQGINGPIFALIALDTHNYEIPIVNNVKVQTTRDMLVQYILDKEIKKGKENAGG
HHHHHHHHCCCCCEEEEEEEECCCEEEEEECCEEEEHHHHHHHHHHHHHHHHCCCCCCCC
WALYGETPDPDITAMAIQGLTPYYKGNPEVKAAVDRAISWLSSAQKDDGGYSSWGSINSE
EEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
SIAQVVVALTGLGINPHKDSRFIKKGNSAIDALLTFADPKGGFMHVKPGGNTNGGAAAGV
HHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHEEEECCCCCEEEECCCCCCCCCCHHHH
IDGMATDQGTYALIAYDRFVNSKNRLYDMTDVIVKAEESHKPENFKAERIGEENLKKNSS
HCCCCCCCCCEEEEEEEHHHCCCCCEEEHHHHHEECCCCCCCCCCCHHHCCHHHHCCCCC
AQVKFDVENISKEDEEVALAIVLYDKNTNEMINYSYVKKILKSGKKEVFAAGFIIPEKGD
CEEEEEHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCC
YLVKAIICDDLNPKKMNVLADPIKIEVE
EEEEEEEECCCCCCCEEEEECCEEEEEC
>Mature Secondary Structure
MFKKKQVKGLLCMLMTFLMVFTTVDTGILGMKQVFAETIKKESIPTEVKEDSEEKKDVEK
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHH
NKSVDTDKKQELTDDKSRNEKIYNDKIVHKAQSESIGTTSIKIVNDLSKVKVGNKVELEV
CCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCEEEEEE
KNDSNVVIPTESLLFTVSNEKLVKEQIDKNLAYILKNVENPSLGTGKGEWSILCLARGNY
CCCCCEEEECHHEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC
PVPKGYYDKYYKNVVKEVQNAKGNLHKVKYTEHSRLILGLASIGRDIKNVGGYNQLEKLA
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHEEEHHHHHHHHHHCCCHHHHHHHH
DFKTVIRQGINGPIFALIALDTHNYEIPIVNNVKVQTTRDMLVQYILDKEIKKGKENAGG
HHHHHHHHCCCCCEEEEEEEECCCEEEEEECCEEEEHHHHHHHHHHHHHHHHCCCCCCCC
WALYGETPDPDITAMAIQGLTPYYKGNPEVKAAVDRAISWLSSAQKDDGGYSSWGSINSE
EEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
SIAQVVVALTGLGINPHKDSRFIKKGNSAIDALLTFADPKGGFMHVKPGGNTNGGAAAGV
HHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHEEEECCCCCEEEECCCCCCCCCCHHHH
IDGMATDQGTYALIAYDRFVNSKNRLYDMTDVIVKAEESHKPENFKAERIGEENLKKNSS
HCCCCCCCCCEEEEEEEHHHCCCCCEEEHHHHHEECCCCCCCCCCCHHHCCHHHHCCCCC
AQVKFDVENISKEDEEVALAIVLYDKNTNEMINYSYVKKILKSGKKEVFAAGFIIPEKGD
CEEEEEHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCC
YLVKAIICDDLNPKKMNVLADPIKIEVE
EEEEEEEECCCCCCCEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA