| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210216
Identifier: 28210216
GI number: 28210216
Start: 469186
End: 469884
Strand: Direct
Name: 28210216
Synonym: CTC00467
Alternate gene names: NA
Gene position: 469186-469884 (Clockwise)
Preceding gene: 28210215
Following gene: 28210217
Centisome position: 16.76
GC content: 29.9
Gene sequence:
>699_bases GTGAGGTATAGCAAAGGAGAAAATACAGATAATTTAGGTGTGGAACTAATAAGTGAAATAACAAAACATGGTGTAAAAAG AACTTTAGCTACTATGCAAAAAAGTCATCTTATAATTAAAGGTGATGTAACAGAAACAGCAGAACTTAAAGTAGCTGATA AAATGGTATCTGTAGAAAAGGGTGATGATAACCTAAAAGTAGCAAATAAAATAGTTAAGGCTTTTGAGGATGATGAAGAT TGGACTGCTGAGAAAATATATATAGTAAGAGCGGGAGAAAATCCATCATCAAATGTAACATTTACATCTAAAAAAGTTAG AGAACATGTAGATAATTTAGGTGAAAGCGGACATGGTATAGTATTTTCACAAGCAAATGAAGAAACAGGAGATACTGGTA TTTCAGAAGTTAAAGAAATATGTAATGTAACTGTAACAAAAGGTGCTACTAAAAATGGAGAGATAAAAGTTAGTATAAAG GATACTAAAAACAATAGAACTTTATCAAGTGTTTCTATAAATGTAGCAAAAGGCGATGATACTAAAAAAGTTGCTGAAGC TATATCAAATGCATTTAAAAATGATGCTCAAAGCAAAAGATTATATAAGATAGAATTACAAAAAGATAATTCTAGAATAG TATTAACTCAATCGGTAGCAGACAACAATATTAATACGGCAGTGAGTATAGACAAATAG
Upstream 100 bases:
>100_bases GAAAATATATTTATACACTTCCTATTATCGAGCGAACGCCTTATGCGATGAAAGTCGCACGTAGGGTGTAGACCAAGCGA AATCCTATGCATTTAGGATA
Downstream 100 bases:
>100_bases TTTACTATTTGGGCTAAAAATAAGAAAAAAGGTTGAATAGATTTAATTTATTCAACCTTTTTAATTAAATATTATTATAA AATTTAATTAAATAATGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MRYSKGENTDNLGVELISEITKHGVKRTLATMQKSHLIIKGDVTETAELKVADKMVSVEKGDDNLKVANKIVKAFEDDED WTAEKIYIVRAGENPSSNVTFTSKKVREHVDNLGESGHGIVFSQANEETGDTGISEVKEICNVTVTKGATKNGEIKVSIK DTKNNRTLSSVSINVAKGDDTKKVAEAISNAFKNDAQSKRLYKIELQKDNSRIVLTQSVADNNINTAVSIDK
Sequences:
>Translated_232_residues MRYSKGENTDNLGVELISEITKHGVKRTLATMQKSHLIIKGDVTETAELKVADKMVSVEKGDDNLKVANKIVKAFEDDED WTAEKIYIVRAGENPSSNVTFTSKKVREHVDNLGESGHGIVFSQANEETGDTGISEVKEICNVTVTKGATKNGEIKVSIK DTKNNRTLSSVSINVAKGDDTKKVAEAISNAFKNDAQSKRLYKIELQKDNSRIVLTQSVADNNINTAVSIDK >Mature_232_residues MRYSKGENTDNLGVELISEITKHGVKRTLATMQKSHLIIKGDVTETAELKVADKMVSVEKGDDNLKVANKIVKAFEDDED WTAEKIYIVRAGENPSSNVTFTSKKVREHVDNLGESGHGIVFSQANEETGDTGISEVKEICNVTVTKGATKNGEIKVSIK DTKNNRTLSSVSINVAKGDDTKKVAEAISNAFKNDAQSKRLYKIELQKDNSRIVLTQSVADNNINTAVSIDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25399; Mature: 25399
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYSKGENTDNLGVELISEITKHGVKRTLATMQKSHLIIKGDVTETAELKVADKMVSVEK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHEEEEC GDDNLKVANKIVKAFEDDEDWTAEKIYIVRAGENPSSNVTFTSKKVREHVDNLGESGHGI CCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCCEE VFSQANEETGDTGISEVKEICNVTVTKGATKNGEIKVSIKDTKNNRTLSSVSINVAKGDD EEECCCCCCCCCCHHHHHHHHCEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCC TKKVAEAISNAFKNDAQSKRLYKIELQKDNSRIVLTQSVADNNINTAVSIDK HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEEEECC >Mature Secondary Structure MRYSKGENTDNLGVELISEITKHGVKRTLATMQKSHLIIKGDVTETAELKVADKMVSVEK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHEEEEC GDDNLKVANKIVKAFEDDEDWTAEKIYIVRAGENPSSNVTFTSKKVREHVDNLGESGHGI CCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEECHHHHHHHHHHCCCCCCEE VFSQANEETGDTGISEVKEICNVTVTKGATKNGEIKVSIKDTKNNRTLSSVSINVAKGDD EEECCCCCCCCCCHHHHHHHHCEEEECCCCCCCEEEEEEEECCCCCEEEEEEEEEECCCC TKKVAEAISNAFKNDAQSKRLYKIELQKDNSRIVLTQSVADNNINTAVSIDK HHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA