| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is cotI [H]
Identifier: 28210032
GI number: 28210032
Start: 245444
End: 246469
Strand: Direct
Name: cotI [H]
Synonym: CTC00269
Alternate gene names: 28210032
Gene position: 245444-246469 (Clockwise)
Preceding gene: 28210030
Following gene: 28210033
Centisome position: 8.77
GC content: 26.02
Gene sequence:
>1026_bases TTGGAGAATAGATATATAAAGAAATTAGTGGAAGATAAGTACAACATAAAAGCTATACATGTAGAAAAAATAAAGAATGT ATATAAAATAAAAAGCAATAGGAAAAACTTTTGTTTGAAACTATTGAAGTATAGATCACAAGAAACATTATTTATAACTT CTGCCATTAATCATCTTTATAATAATGGTTTTAAAAATACTCCTAAAATTATACAAACTGTAGATAAGAAGGATTGTATA TCTTTAGGAGATTATTATGGCTATTTAACACCATGGATAGAAACTAGACATTGTAATTATGAAGATCCTAGAGATGTTCA GCTAGCTGCATTTACTTTAGGACAACTTCATAAGAATAGCATTAATTTTAGTTGGAATAAATATATAAAATCAAGGTATA GGATGGGAAGATGGATTCAGGATTTTAACAGTAAAAAATCAGATATAAGTTTTTTTAAAAATGAAATAGATAAAAAGGAT AAGCCGTCCTATTTTGATAATCTCTTTAGAAAAGTAATAGATGAGGAATTAAGAAGAATTGATAAAAGTATATATAATCT AGAGAGGAGTGATTACTTAAATAAAATTCAATCAGAGAAGAAAAAAAATCCCTTTTGTCACCATGATTATGCCAACCATA ATGTATTAATAGATAAAAATGATTCTGTATATATAATAGATTTTGATTATTGCATATTGGATACTCATTTACACGATTTA TGCAGTTTAATTATACGTGTAATGAAAAATGGTAAATGGAACATAGAAAATGCAAAAAAAATAATGGATAGTTATAGTTT AAACTATTCTATAAATAAAAAAGATATAAAAATTATGGCTGCTTTTATAGAGTTTCCTCAAGATTTTTGGCAAGTAGGAC TTCAATACTATGCAGAAAAACAACCTTGGAAGGAAAAAGTTTTTATAAATAAAATAAAAAGAATAGTGGATGACAGAGAA GCAAAACAGGAATTTGTAGAGGAGTTTAGATGTATAAACTATGGAAGCGGAGGGTGTTATGATTAG
Upstream 100 bases:
>100_bases AATAAAATATGTATAATATCCTTTAGATATTACCTTTTAGCACATACAAAGTAATTAATACATATAATACAATTATAAGT AAGAAGCAGGGGGATAAATA
Downstream 100 bases:
>100_bases AGAAAATGCTTTTTTAGAGTATTTAAAAGATATAAATATATTTGTAGATGAATCTATAGGTTCTGACATTAAAGTTAAAA ATGTAGATGAGACTAAATTA
Product: spore coat protein S
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MENRYIKKLVEDKYNIKAIHVEKIKNVYKIKSNRKNFCLKLLKYRSQETLFITSAINHLYNNGFKNTPKIIQTVDKKDCI SLGDYYGYLTPWIETRHCNYEDPRDVQLAAFTLGQLHKNSINFSWNKYIKSRYRMGRWIQDFNSKKSDISFFKNEIDKKD KPSYFDNLFRKVIDEELRRIDKSIYNLERSDYLNKIQSEKKKNPFCHHDYANHNVLIDKNDSVYIIDFDYCILDTHLHDL CSLIIRVMKNGKWNIENAKKIMDSYSLNYSINKKDIKIMAAFIEFPQDFWQVGLQYYAEKQPWKEKVFINKIKRIVDDRE AKQEFVEEFRCINYGSGGCYD
Sequences:
>Translated_341_residues MENRYIKKLVEDKYNIKAIHVEKIKNVYKIKSNRKNFCLKLLKYRSQETLFITSAINHLYNNGFKNTPKIIQTVDKKDCI SLGDYYGYLTPWIETRHCNYEDPRDVQLAAFTLGQLHKNSINFSWNKYIKSRYRMGRWIQDFNSKKSDISFFKNEIDKKD KPSYFDNLFRKVIDEELRRIDKSIYNLERSDYLNKIQSEKKKNPFCHHDYANHNVLIDKNDSVYIIDFDYCILDTHLHDL CSLIIRVMKNGKWNIENAKKIMDSYSLNYSINKKDIKIMAAFIEFPQDFWQVGLQYYAEKQPWKEKVFINKIKRIVDDRE AKQEFVEEFRCINYGSGGCYD >Mature_341_residues MENRYIKKLVEDKYNIKAIHVEKIKNVYKIKSNRKNFCLKLLKYRSQETLFITSAINHLYNNGFKNTPKIIQTVDKKDCI SLGDYYGYLTPWIETRHCNYEDPRDVQLAAFTLGQLHKNSINFSWNKYIKSRYRMGRWIQDFNSKKSDISFFKNEIDKKD KPSYFDNLFRKVIDEELRRIDKSIYNLERSDYLNKIQSEKKKNPFCHHDYANHNVLIDKNDSVYIIDFDYCILDTHLHDL CSLIIRVMKNGKWNIENAKKIMDSYSLNYSINKKDIKIMAAFIEFPQDFWQVGLQYYAEKQPWKEKVFINKIKRIVDDRE AKQEFVEEFRCINYGSGGCYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Spore wall, spore coat [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CotS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014255 [H]
Pfam domain/function: PF01636 APH [H]
EC number: NA
Molecular weight: Translated: 41034; Mature: 41034
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENRYIKKLVEDKYNIKAIHVEKIKNVYKIKSNRKNFCLKLLKYRSQETLFITSAINHLY CCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHH NNGFKNTPKIIQTVDKKDCISLGDYYGYLTPWIETRHCNYEDPRDVQLAAFTLGQLHKNS HCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC INFSWNKYIKSRYRMGRWIQDFNSKKSDISFFKNEIDKKDKPSYFDNLFRKVIDEELRRI CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH DKSIYNLERSDYLNKIQSEKKKNPFCHHDYANHNVLIDKNDSVYIIDFDYCILDTHLHDL HHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHH CSLIIRVMKNGKWNIENAKKIMDSYSLNYSINKKDIKIMAAFIEFPQDFWQVGLQYYAEK HHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCHHHHHHHHHHHHCC QPWKEKVFINKIKRIVDDREAKQEFVEEFRCINYGSGGCYD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MENRYIKKLVEDKYNIKAIHVEKIKNVYKIKSNRKNFCLKLLKYRSQETLFITSAINHLY CCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEHHHHHHHHH NNGFKNTPKIIQTVDKKDCISLGDYYGYLTPWIETRHCNYEDPRDVQLAAFTLGQLHKNS HCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC INFSWNKYIKSRYRMGRWIQDFNSKKSDISFFKNEIDKKDKPSYFDNLFRKVIDEELRRI CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH DKSIYNLERSDYLNKIQSEKKKNPFCHHDYANHNVLIDKNDSVYIIDFDYCILDTHLHDL HHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHH CSLIIRVMKNGKWNIENAKKIMDSYSLNYSINKKDIKIMAAFIEFPQDFWQVGLQYYAEK HHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCHHHHHHHHHHHHCC QPWKEKVFINKIKRIVDDREAKQEFVEEFRCINYGSGGCYD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7545510; 9387221; 9384377 [H]