Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

Click here to switch to the map view.

The map label for this gene is 28198877

Identifier: 28198877

GI number: 28198877

Start: 1174955

End: 1175938

Strand: Reverse

Name: 28198877

Synonym: PD0978

Alternate gene names: NA

Gene position: 1175938-1174955 (Counterclockwise)

Preceding gene: 28198878

Following gene: 28198876

Centisome position: 46.67

GC content: 57.42

Gene sequence:

>984_bases
ATGAACATGATTGACATACGCCGCCGTCAGATAGCCGATGCGTTGAACCCGATGTTGCTGACCGATGCACGGTATCAGAC
CTGTGATGCCACCCAAGCGCTGGCGTTTTTGGTGTCGCAACTGACCCATGTTGAATCGACGATCTACGCCCGCCAGCGCC
AAGGCATCCAGTACCGGGATTTGGTGCCCATCAGCACCGAAGCGTGCGAGTACGCCACCTCGGTGACCTATCAAATGTAT
GACTATTCCGGACGGGGCAAGCGGCATTCTGGACGGGGCGAAGATATTCCGACGGTCGATGTGGCCTACGCACAAAAGAG
CGTGCCTGTCGTGTTGGGCACCATTGGCTACGATTACACCACCGAGGAACTGCGCCAATCGGCCTTTCTGCGTAAACCCC
TCAACACCGCGCGGGCCGATGCGGCGATGGATGCCTATGAGCGCCATATCAACGATGTGGCGTTGTTTGGTGAGGACGAA
CTCACCGGCCTGTATACCCATCCTGGCGTGCCGGTCCTGTTGAACACCGCCGGACCTTGGATCGGTCAATCGCCCGCCCA
GGTGCTAGCCTTGTTCAACGCCCTGATCTCCAGCGCTTGGATGAACACCCACTATGTGGAGATGATCGATACCGTTCTCT
TGCCTGGTAGCGTGATGAACTATCTGGTGTCCACCCCGCGCAGTGACAACAGCGATAAAACCATTCTGCATTACGTGCTG
GAAAACAACATTGCCAAAGCTGAGCGTGGCCTTGATCTGACCGTCCGCACCGGCTACGGCTTAGAGACGGCAGGGGAAGG
CGGCACGACCCGCGCCATGCTGTATACGAAGAACCCCACCAAGCTGGTGCTGCATCTGCCCATGCCGATCCGGTTTTTGC
CCCCGCAACCCAAGGGCCTGACGTTTGATATTCCAGGCGAATACAAATACAGCGGCGTGGAGTTCCGTTATCCCAAGTCC
GCCCTGTATGCCGACGGCATTTGA

Upstream 100 bases:

>100_bases
CATCGCTTCAGACACCATTCCCTACCCCCAGGCCATCTGGGATAGCACGAGCGCCCCCGGAGCGCTGGGCGTAATCCGCA
TTCTTAAATAAGGGACCTGC

Downstream 100 bases:

>100_bases
GTCTGAGGCCACACACATGACACCAGCGCCCTGAGGCGCTTTTTTTTGGGAGAACGCAGCACCATGACCACGATCATGCT
CAAGAACACCCGCAGCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Exported Phage Protein

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRDLVPISTEACEYATSVTYQMY
DYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYTTEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDE
LTGLYTHPGVPVLLNTAGPWIGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL
ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMLYTKNPTKLVLHLPMPIRFLPPQPKGLTFDIPGEYKYSGVEFRYPKS
ALYADGI

Sequences:

>Translated_327_residues
MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRDLVPISTEACEYATSVTYQMY
DYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYTTEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDE
LTGLYTHPGVPVLLNTAGPWIGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL
ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMLYTKNPTKLVLHLPMPIRFLPPQPKGLTFDIPGEYKYSGVEFRYPKS
ALYADGI
>Mature_327_residues
MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRDLVPISTEACEYATSVTYQMY
DYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYTTEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDE
LTGLYTHPGVPVLLNTAGPWIGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL
ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMLYTKNPTKLVLHLPMPIRFLPPQPKGLTFDIPGEYKYSGVEFRYPKS
ALYADGI

Specific function: Unknown

COG id: COG4834

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36402; Mature: 36402

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRD
CCCHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LVPISTEACEYATSVTYQMYDYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYT
CCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCCCC
TEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDELTGLYTHPGVPVLLNTAGPW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCCCEEEECCCCC
IGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHEEHHHH
ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMLYTKNPTKLVLHLPMPIRFLPPQPKGL
HCCHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEECCCCCCCE
TFDIPGEYKYSGVEFRYPKSALYADGI
EEECCCCEEECCEEEECCCCCCCCCCC
>Mature Secondary Structure
MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRD
CCCHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LVPISTEACEYATSVTYQMYDYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYT
CCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCCCC
TEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDELTGLYTHPGVPVLLNTAGPW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCCCEEEECCCCC
IGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHEEHHHH
ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMLYTKNPTKLVLHLPMPIRFLPPQPKGL
HCCHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEECCCCCCCE
TFDIPGEYKYSGVEFRYPKSALYADGI
EEECCCCEEECCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA