| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is menH [H]
Identifier: 27366432
GI number: 27366432
Start: 3244801
End: 3245592
Strand: Reverse
Name: menH [H]
Synonym: VV1_3171
Alternate gene names: 27366432
Gene position: 3245592-3244801 (Counterclockwise)
Preceding gene: 27366433
Following gene: 326424148
Centisome position: 98.89
GC content: 48.61
Gene sequence:
>792_bases ATGTCCGTTCTCTCGTTTAATTATCAGCAAGGCAATGGTGATAGCCGTTCGCCCGTGTTGGTGTTACTGCACGGTTTATT GGGTAGTGCAGAAGATTGGCGTGCCACGCAATGTTCACTCAAAGAATATCCAACCCTAACGATTGACCTTGCAGGGCACG GCCAAAGTGTTGGCATTGCCCCAAGTAGTGCTGCGGAGAGTGCACAGCAAGTGGCGATGGTGATTGAGCAGCAATTGGCC CAACGCCCATGTATTCTGATTGGTTATTCAATGGGAGGCCGAATTGCCATGCAGGGGCTTGTTGAGCACGCCTTTGCCGC ACTGAATCTACGCGGAGCTTTGATTGAAGGCGGCAATTTTGGTTTAGTCAGTGAGCAAGAAAAGCAGCAACGCTGGATCA GTGATAGCCATTGGGCGAAGCGATTTCGTGAAGAGCCCATTGAACAGGTATTAGCCGATTGGTATCAGCAAGGGGTATTT TCTTCACTAAACCATGCGCAAAAACAAACCTTGATAGCAAAACGAAGTGCTAATCTTGGTGCGTCAGTCGCGGAGATGCT ATTAGCCACTTCTTTGGCGAAGCAACCGAATCTTTTACCTCAGTTGCAACGCTCTAGCGTGCCTTTGCACTATGTATGCG GCGAAAAAGACACAAAATTTCAAGAACTAGCGAGGCAGAGTGGCTTGTCCTGCTCGATAGTTGACAATGCGGGCCACAAT GTCCATCAAGAGCAGCCTAACGCTTTTGCTGACATCGTCCGTGCGTTTATTCATTCGGTTTATCAACGATAA
Upstream 100 bases:
>100_bases CGAATTGTTGGCCATTTTGCACACGGCTGTGGCGCTTTATTGGTTGAAGTCAACACGCCGCCAAACCAAGCGTCACAGCA CATAAAACAATTGGCTGATC
Downstream 100 bases:
>100_bases ACACATTAGAACAATGGGAACCACCATGGCTAAAACAGTAGGCATCACTGAAGCAGAACTTTACGCACCAGTTAATTGGA ATGACTGTAGTGCGCCCTAT
Product: 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase
Products: NA
Alternate protein names: SHCHC synthase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSVLSFNYQQGNGDSRSPVLVLLHGLLGSAEDWRATQCSLKEYPTLTIDLAGHGQSVGIAPSSAAESAQQVAMVIEQQLA QRPCILIGYSMGGRIAMQGLVEHAFAALNLRGALIEGGNFGLVSEQEKQQRWISDSHWAKRFREEPIEQVLADWYQQGVF SSLNHAQKQTLIAKRSANLGASVAEMLLATSLAKQPNLLPQLQRSSVPLHYVCGEKDTKFQELARQSGLSCSIVDNAGHN VHQEQPNAFADIVRAFIHSVYQR
Sequences:
>Translated_263_residues MSVLSFNYQQGNGDSRSPVLVLLHGLLGSAEDWRATQCSLKEYPTLTIDLAGHGQSVGIAPSSAAESAQQVAMVIEQQLA QRPCILIGYSMGGRIAMQGLVEHAFAALNLRGALIEGGNFGLVSEQEKQQRWISDSHWAKRFREEPIEQVLADWYQQGVF SSLNHAQKQTLIAKRSANLGASVAEMLLATSLAKQPNLLPQLQRSSVPLHYVCGEKDTKFQELARQSGLSCSIVDNAGHN VHQEQPNAFADIVRAFIHSVYQR >Mature_262_residues SVLSFNYQQGNGDSRSPVLVLLHGLLGSAEDWRATQCSLKEYPTLTIDLAGHGQSVGIAPSSAAESAQQVAMVIEQQLAQ RPCILIGYSMGGRIAMQGLVEHAFAALNLRGALIEGGNFGLVSEQEKQQRWISDSHWAKRFREEPIEQVLADWYQQGVFS SLNHAQKQTLIAKRSANLGASVAEMLLATSLAKQPNLLPQLQRSSVPLHYVCGEKDTKFQELARQSGLSCSIVDNAGHNV HQEQPNAFADIVRAFIHSVYQR
Specific function: Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC). Is also
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. MenH family [H]
Homologues:
Organism=Escherichia coli, GI1788598, Length=245, Percent_Identity=39.5918367346939, Blast_Score=178, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR022485 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =4.2.99.20 [H]
Molecular weight: Translated: 28835; Mature: 28704
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLSFNYQQGNGDSRSPVLVLLHGLLGSAEDWRATQCSLKEYPTLTIDLAGHGQSVGIA CCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCC PSSAAESAQQVAMVIEQQLAQRPCILIGYSMGGRIAMQGLVEHAFAALNLRGALIEGGNF CCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCC GLVSEQEKQQRWISDSHWAKRFREEPIEQVLADWYQQGVFSSLNHAQKQTLIAKRSANLG CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ASVAEMLLATSLAKQPNLLPQLQRSSVPLHYVCGEKDTKFQELARQSGLSCSIVDNAGHN HHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCCC VHQEQPNAFADIVRAFIHSVYQR CCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVLSFNYQQGNGDSRSPVLVLLHGLLGSAEDWRATQCSLKEYPTLTIDLAGHGQSVGIA CEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCC PSSAAESAQQVAMVIEQQLAQRPCILIGYSMGGRIAMQGLVEHAFAALNLRGALIEGGNF CCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCCC GLVSEQEKQQRWISDSHWAKRFREEPIEQVLADWYQQGVFSSLNHAQKQTLIAKRSANLG CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ASVAEMLLATSLAKQPNLLPQLQRSSVPLHYVCGEKDTKFQELARQSGLSCSIVDNAGHN HHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCCC VHQEQPNAFADIVRAFIHSVYQR CCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA