| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is menB [H]
Identifier: 326424148
GI number: 326424148
Start: 3243909
End: 3244787
Strand: Reverse
Name: menB [H]
Synonym: NA
Alternate gene names: 326424148
Gene position: 3244787-3243909 (Counterclockwise)
Preceding gene: 27366432
Following gene: 27366430
Centisome position: 98.87
GC content: 49.37
Gene sequence:
>879_bases ATGGGAACCACCATGGCTAAAACAGTAGGCATCACTGAAGCAGAACTTTACGCACCAGTTAATTGGAATGACTGTAGTGC GCCCTATGAAGATATTCAGTACCACAAGTCGGAAGACGGCATTGCAAAAATCACCATTGCACGCCCTCAAGTGCGTAATG CATTTCGCCCGCAAACCGTCAAAGAAATGATCCAAGCACTGGCGGATGCTCGCTATGACTCTAACGTGGGCGTGATCATT TTGACCGGTCTCGGTGAAGACGCGTTCTGCTCTGGCGGCGACCAGAAGATCCGCGGTGATTACGGCGGCTATAAAGATGA CTCTGGTGTTCATCACCTGAATGTTCTTGATTTCCAACGTGATATTCGTACTTGTCCAAAACCTGTTATTGCGTCAGTCG CTGGTTGGGCTGTCGGTGGCGGCCACGTTCTTCATATGATGTGTGACTTAACCATCGCGGCTGAAAACGCGCAATTTGGT CAAACTGGACCAAAAGTGGGCTCGTTTGATGGCGGTTGGGGTGCGTCATACATGGCACGTATTGTCGGACAGAAAAAAGC ACGTGAGATTTGGTTCCTATGTCGTTTTTATGACGCTCAAGAAGCGTTGGATATGGGGCTAGTGAACACGGTCGTCCCTG TAGAAGAATTAGAGAAAGAAACCGTACGTTGGTGTCGTGAAGTACTTCAGCACAGCCCGATGGCATTGCGTTGCCTTAAA GCAGCATTGAACGCCGATTGCGATGGTCAAGCGGGTCTTCAAGAGTTGGCGGGCAACGCCACAATGATGTTCTATATGAC GGATGAAGGGCAAGAAGGGCGCAATGCGTTCAACGAAAAACGTCGTCCAGACTTCAATAAGTTTCCACGCAACCCTTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
NA
Sequences:
>Translated_292_residues MGTTMAKTVGITEAELYAPVNWNDCSAPYEDIQYHKSEDGIAKITIARPQVRNAFRPQTVKEMIQALADARYDSNVGVII LTGLGEDAFCSGGDQKIRGDYGGYKDDSGVHHLNVLDFQRDIRTCPKPVIASVAGWAVGGGHVLHMMCDLTIAAENAQFG QTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRFYDAQEALDMGLVNTVVPVEELEKETVRWCREVLQHSPMALRCLK AALNADCDGQAGLQELAGNATMMFYMTDEGQEGRNAFNEKRRPDFNKFPRNP >Mature_291_residues GTTMAKTVGITEAELYAPVNWNDCSAPYEDIQYHKSEDGIAKITIARPQVRNAFRPQTVKEMIQALADARYDSNVGVIIL TGLGEDAFCSGGDQKIRGDYGGYKDDSGVHHLNVLDFQRDIRTCPKPVIASVAGWAVGGGHVLHMMCDLTIAAENAQFGQ TGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRFYDAQEALDMGLVNTVVPVEELEKETVRWCREVLQHSPMALRCLKA ALNADCDGQAGLQELAGNATMMFYMTDEGQEGRNAFNEKRRPDFNKFPRNP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=246, Percent_Identity=34.1463414634146, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI31542718, Length=252, Percent_Identity=31.3492063492063, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI4502327, Length=254, Percent_Identity=29.9212598425197, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI45643119, Length=209, Percent_Identity=30.622009569378, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI260275230, Length=209, Percent_Identity=30.622009569378, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI260274832, Length=209, Percent_Identity=30.622009569378, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI25453481, Length=250, Percent_Identity=24.8, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI51538573, Length=250, Percent_Identity=24.8, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI4757966, Length=250, Percent_Identity=24.8, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI51538581, Length=250, Percent_Identity=24.8, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI4757968, Length=250, Percent_Identity=25.2, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI49355787, Length=250, Percent_Identity=25.2, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI157694516, Length=226, Percent_Identity=23.4513274336283, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI70995211, Length=234, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI213417737, Length=226, Percent_Identity=23.4513274336283, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI68989263, Length=214, Percent_Identity=28.9719626168224, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI116235487, Length=235, Percent_Identity=25.531914893617, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1788597, Length=280, Percent_Identity=86.0714285714286, Blast_Score=515, Evalue=1e-147, Organism=Escherichia coli, GI1787659, Length=244, Percent_Identity=29.9180327868852, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI87082183, Length=237, Percent_Identity=29.535864978903, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI221142681, Length=209, Percent_Identity=31.5789473684211, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1787660, Length=259, Percent_Identity=27.7992277992278, Blast_Score=74, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17554946, Length=284, Percent_Identity=32.0422535211268, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI25145438, Length=258, Percent_Identity=32.9457364341085, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17540714, Length=231, Percent_Identity=27.7056277056277, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17535521, Length=213, Percent_Identity=27.6995305164319, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17534483, Length=278, Percent_Identity=25.1798561151079, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17560910, Length=203, Percent_Identity=29.064039408867, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI20129971, Length=269, Percent_Identity=32.7137546468402, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI24653477, Length=269, Percent_Identity=32.7137546468402, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI24653139, Length=276, Percent_Identity=28.6231884057971, Blast_Score=110, Evalue=8e-25, Organism=Drosophila melanogaster, GI21357171, Length=217, Percent_Identity=30.4147465437788, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI24654903, Length=205, Percent_Identity=29.7560975609756, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI19922422, Length=190, Percent_Identity=26.8421052631579, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 32236; Mature: 32105
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTMAKTVGITEAELYAPVNWNDCSAPYEDIQYHKSEDGIAKITIARPQVRNAFRPQTV CCCCHHHHCCCCHHHEEECCCCCCCCCCHHHHHHCCCCCCEEEEEEECHHHHHCCCCHHH KEMIQALADARYDSNVGVIILTGLGEDAFCSGGDQKIRGDYGGYKDDSGVHHLNVLDFQR HHHHHHHHHCCCCCCCCEEEEECCCCCHHCCCCCCEECCCCCCCCCCCCCEEEEHHHHHH DIRTCPKPVIASVAGWAVGGGHVLHMMCDLTIAAENAQFGQTGPKVGSFDGGWGASYMAR HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHH IVGQKKAREIWFLCRFYDAQEALDMGLVNTVVPVEELEKETVRWCREVLQHSPMALRCLK HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH AALNADCDGQAGLQELAGNATMMFYMTDEGQEGRNAFNEKRRPDFNKFPRNP HHHCCCCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GTTMAKTVGITEAELYAPVNWNDCSAPYEDIQYHKSEDGIAKITIARPQVRNAFRPQTV CCCHHHHCCCCHHHEEECCCCCCCCCCHHHHHHCCCCCCEEEEEEECHHHHHCCCCHHH KEMIQALADARYDSNVGVIILTGLGEDAFCSGGDQKIRGDYGGYKDDSGVHHLNVLDFQR HHHHHHHHHCCCCCCCCEEEEECCCCCHHCCCCCCEECCCCCCCCCCCCCEEEEHHHHHH DIRTCPKPVIASVAGWAVGGGHVLHMMCDLTIAAENAQFGQTGPKVGSFDGGWGASYMAR HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHH IVGQKKAREIWFLCRFYDAQEALDMGLVNTVVPVEELEKETVRWCREVLQHSPMALRCLK HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH AALNADCDGQAGLQELAGNATMMFYMTDEGQEGRNAFNEKRRPDFNKFPRNP HHHCCCCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]