| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
Click here to switch to the map view.
The map label for this gene is 27364682
Identifier: 27364682
GI number: 27364682
Start: 1266375
End: 1267262
Strand: Reverse
Name: 27364682
Synonym: VV1_1282
Alternate gene names: NA
Gene position: 1267262-1266375 (Counterclockwise)
Preceding gene: 27364683
Following gene: 27364680
Centisome position: 38.61
GC content: 52.82
Gene sequence:
>888_bases ATGGGATTTGAATGGCTTGCACTGGCCGCAGCACTACTGTGGGCGATCGCCAGTTTACTTTCGGTCACGCCGGCTCAGCA TTTGGGGTCGTTTGCTTACAGTCGTTGGCGAATGGGATGCACGGCGGTCATGCTCTCCAGTATGGCTCTGTTTACCGGAG GCTGGTCGAGTGTCATGGCAGAGCACATCACGCCCATGATGTTTTCAGGCTTAATTGGCATCTTTATTGGCGATACCGCG CTATTTGCTTGCTTAAATCGTATGGGACCTCGCCAAGCGGGCTTGCTCTTCTCTTGCCATGCCGTCTTTTCCGCCATTCT CGGTTACTTTCTATTTAGCGAAAGTATGACGTCAATGGAGCTACTCGGATCGCTGCTGGTGTTTTCCGGCGTTGTTCTGG CGATCTTTTTTGGCCGACGTGGACAAAGTCAGAATGCACTGGAAACCGTCAAAGGTGCAGCTTGGATCGGCATCGCCTTG GGGTTACTGGCGGCTCTATGCCAAGCACTAGGGGGCATTATTGCCAAGCCAGTGATGCAGACTGACATCGATCCTGTCGC AGCATCAGCGATTCGTATGATCAGCGCTTTTGTGGCACATTGCCTCCTACGAGCCACTGGCGCAAAAATTTCTCGGGCAA CACAAAAAATGAATGGGCGTATCTTTACCATTACCGCCATTAACGGCTTTCTCGCCATGGCGGTGGGCATGACGTTGATC CTGTACGCTTTGCGCGATGGGAATGTCGGAATGGTCGCCTTGCTCTCCTCGACAACCCCAATCATGTTATTGCCAATACT GTGGATCTACACCAAACAACGCCCCAATCGTTACGCGTGGCTTGGTGCCTTCGTCGCAGTGGCGGGGACAGCCATCTTAG TTCAGTGA
Upstream 100 bases:
>100_bases GAAAGCACGACCACAAGGCGGAGAAAGTCACGTCTGTGCTTTGCCAAGATGATAACTTGAGGCATATTGTCGATCTCTTC AATTAGGGATCACACAATCA
Downstream 100 bases:
>100_bases CGCACAGAGACAAAAAAGCCCGAGTCATGCTCGGGCTTCCATTTAGCTGTTTAGCAAGCTTACTTAACCAATACTTGGCC AGTCATCTCTGCTGGAATCT
Product: drug/metabolite transporter (DMT) superfamily permease
Products: NA
Alternate protein names: Drug/Metabolite Exporter Family Protein; DMT Family Permease; Integral Membrane; Permease DMT Superfamily; Conserved Domain Protein; Transporter Drug/Metabolite Exporter Family; Integral Membrane Protein; Permeases Of Drug/Metabolite Transporter
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MGFEWLALAAALLWAIASLLSVTPAQHLGSFAYSRWRMGCTAVMLSSMALFTGGWSSVMAEHITPMMFSGLIGIFIGDTA LFACLNRMGPRQAGLLFSCHAVFSAILGYFLFSESMTSMELLGSLLVFSGVVLAIFFGRRGQSQNALETVKGAAWIGIAL GLLAALCQALGGIIAKPVMQTDIDPVAASAIRMISAFVAHCLLRATGAKISRATQKMNGRIFTITAINGFLAMAVGMTLI LYALRDGNVGMVALLSSTTPIMLLPILWIYTKQRPNRYAWLGAFVAVAGTAILVQ
Sequences:
>Translated_295_residues MGFEWLALAAALLWAIASLLSVTPAQHLGSFAYSRWRMGCTAVMLSSMALFTGGWSSVMAEHITPMMFSGLIGIFIGDTA LFACLNRMGPRQAGLLFSCHAVFSAILGYFLFSESMTSMELLGSLLVFSGVVLAIFFGRRGQSQNALETVKGAAWIGIAL GLLAALCQALGGIIAKPVMQTDIDPVAASAIRMISAFVAHCLLRATGAKISRATQKMNGRIFTITAINGFLAMAVGMTLI LYALRDGNVGMVALLSSTTPIMLLPILWIYTKQRPNRYAWLGAFVAVAGTAILVQ >Mature_294_residues GFEWLALAAALLWAIASLLSVTPAQHLGSFAYSRWRMGCTAVMLSSMALFTGGWSSVMAEHITPMMFSGLIGIFIGDTAL FACLNRMGPRQAGLLFSCHAVFSAILGYFLFSESMTSMELLGSLLVFSGVVLAIFFGRRGQSQNALETVKGAAWIGIALG LLAALCQALGGIIAKPVMQTDIDPVAASAIRMISAFVAHCLLRATGAKISRATQKMNGRIFTITAINGFLAMAVGMTLIL YALRDGNVGMVALLSSTTPIMLLPILWIYTKQRPNRYAWLGAFVAVAGTAILVQ
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31429; Mature: 31298
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFEWLALAAALLWAIASLLSVTPAQHLGSFAYSRWRMGCTAVMLSSMALFTGGWSSVMA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH EHITPMMFSGLIGIFIGDTALFACLNRMGPRQAGLLFSCHAVFSAILGYFLFSESMTSME HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH LLGSLLVFSGVVLAIFFGRRGQSQNALETVKGAAWIGIALGLLAALCQALGGIIAKPVMQ HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDIDPVAASAIRMISAFVAHCLLRATGAKISRATQKMNGRIFTITAINGFLAMAVGMTLI CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHH LYALRDGNVGMVALLSSTTPIMLLPILWIYTKQRPNRYAWLGAFVAVAGTAILVQ HHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GFEWLALAAALLWAIASLLSVTPAQHLGSFAYSRWRMGCTAVMLSSMALFTGGWSSVMA CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH EHITPMMFSGLIGIFIGDTALFACLNRMGPRQAGLLFSCHAVFSAILGYFLFSESMTSME HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH LLGSLLVFSGVVLAIFFGRRGQSQNALETVKGAAWIGIALGLLAALCQALGGIIAKPVMQ HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDIDPVAASAIRMISAFVAHCLLRATGAKISRATQKMNGRIFTITAINGFLAMAVGMTLI CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHH LYALRDGNVGMVALLSSTTPIMLLPILWIYTKQRPNRYAWLGAFVAVAGTAILVQ HHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA