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The map label for this gene is yibN [H]

Identifier: 27364680

GI number: 27364680

Start: 1263934

End: 1264368

Strand: Reverse

Name: yibN [H]

Synonym: VV1_1280

Alternate gene names: 27364680

Gene position: 1264368-1263934 (Counterclockwise)

Preceding gene: 27364682

Following gene: 27364679

Centisome position: 38.53

GC content: 45.06

Gene sequence:

>435_bases
ATGCAAGAGTACATCGACTTTATTCAGCAAAATATGATCATGTTTTTGGCATGGGTTGGCCTAGTGATCGCCGTGATAAT
GAGCTTCGTGAAATCGGCTACCGCCGCGTACAAGATCATTACTGTCAACGAACTTACCGCATTGGTAAACCGTGAAAACG
GCCAAGTGATCGATATTCGTGCGAAAGACGAGTTCAGAAAAGGTCACATCACCGACGCAGTTCACATTTTGCCATCAGAC
ATCAAGAACGGTAACTTCGGTAGCCTTGAAAACCGTAAATCTGACCCAATCATCGTAGTATGCAAAACAGGCCAAACCGC
GCAAGAAAGCGCTAACCTGTTGGCTAAAGCGGGTTTTGAAAACGTCAGCGTATTGAAAAACGGTCTGATTTCGTGGAGCG
AAGCAAACTTACCTTTGGTACGTAGCAAACGTTAA

Upstream 100 bases:

>100_bases
TTTATTGGTTAGAAAGTTTTAACTCACTCGCCACTCGCGACTAACCTCGTTATACTCCTTGCCACTTTATTTTTCCGCTT
ATGGTTCGAGAGCAAACAAG

Downstream 100 bases:

>100_bases
TCCCCACTAAAACCCGTCAGATAACTGGTTATTATCAAAGCAGTTAATCATCTAAGTTGTGATACTTGGCACGTAATGAC
GGGTTGATCTGGTCATTGAT

Product: Rhodanese-related sulfurtransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MQEYIDFIQQNMIMFLAWVGLVIAVIMSFVKSATAAYKIITVNELTALVNRENGQVIDIRAKDEFRKGHITDAVHILPSD
IKNGNFGSLENRKSDPIIVVCKTGQTAQESANLLAKAGFENVSVLKNGLISWSEANLPLVRSKR

Sequences:

>Translated_144_residues
MQEYIDFIQQNMIMFLAWVGLVIAVIMSFVKSATAAYKIITVNELTALVNRENGQVIDIRAKDEFRKGHITDAVHILPSD
IKNGNFGSLENRKSDPIIVVCKTGQTAQESANLLAKAGFENVSVLKNGLISWSEANLPLVRSKR
>Mature_144_residues
MQEYIDFIQQNMIMFLAWVGLVIAVIMSFVKSATAAYKIITVNELTALVNRENGQVIDIRAKDEFRKGHITDAVHILPSD
IKNGNFGSLENRKSDPIIVVCKTGQTAQESANLLAKAGFENVSVLKNGLISWSEANLPLVRSKR

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=143, Percent_Identity=47.5524475524476, Blast_Score=146, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15962; Mature: 15962

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEYIDFIQQNMIMFLAWVGLVIAVIMSFVKSATAAYKIITVNELTALVNRENGQVIDIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHCCCCCCEEEEE
AKDEFRKGHITDAVHILPSDIKNGNFGSLENRKSDPIIVVCKTGQTAQESANLLAKAGFE
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCC
NVSVLKNGLISWSEANLPLVRSKR
HHHHHHHCCCCCCCCCCCEECCCC
>Mature Secondary Structure
MQEYIDFIQQNMIMFLAWVGLVIAVIMSFVKSATAAYKIITVNELTALVNRENGQVIDIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHCCCCCCEEEEE
AKDEFRKGHITDAVHILPSDIKNGNFGSLENRKSDPIIVVCKTGQTAQESANLLAKAGFE
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCC
NVSVLKNGLISWSEANLPLVRSKR
HHHHHHHCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]