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The map label for this gene is yjeK [H]

Identifier: 27364664

GI number: 27364664

Start: 1248240

End: 1249262

Strand: Reverse

Name: yjeK [H]

Synonym: VV1_1263

Alternate gene names: 27364664

Gene position: 1249262-1248240 (Counterclockwise)

Preceding gene: 27364667

Following gene: 27364663

Centisome position: 38.07

GC content: 47.8

Gene sequence:

>1023_bases
ATGCCGCACATAATACCCCGAAAAGTCGAATCTGTTGAGCAAAACTGGCTCAAACAGCTAGCGAATGGGATCTCTGATCC
TGCAACCTTGCTCAAAATGTTGGAAATCGATCCAACACCTTGGCAAGACGGGTTCTCAGCACGTGGATTGTTCGCACAAC
GCGTGCCGCAAAGTTTTGTCGAAAGAATGGAAAAACGTAATCCGAATGATCCACTCTTGCGCCAAGTGTTACCCGTTAGC
GAAGAGCATGAAATCCATCCGGGTTATTCTGTCGATCCCCTTGAGGAGCAAGACAATGCGATTCCTGGCTTACTCCACAA
GTACCACAATCGTGCGCTGATGATCGTCAAAGGAGGATGCGCGATTAACTGCCGCTATTGTTTCCGCCGTCACTTTCCTT
ATCAAGACAACAAAGGCAGCAAAACGGTTTGGCAGCAAAGCCTCGATTACATTGCACAAAATAGCGCACTGAATGAAGTG
ATCTTTTCCGGTGGCGATCCCTTGATGGCCAAAGATGATGAGTTACAGTGGTTAATCGAACGTATTGCTGACATTCCCCA
CATCAAGCGACTACGCATTCACTCGCGTTTACCTGTGGTGATACCCGCACGCATCACAACGGCACTGTGCCAGTTGCTAG
AACAAACGCGTTTGCAAGTCATTTTGGTCACGCACATCAACCATGCCAATGAGATCAACGCCGAATTAACCTCGCAACTG
CATCGGTTAAAACGCATAGGTGTGACATTATTGAATCAAGGCGTGCTGCTGAAAGGAGTGAATGATAGCGTCGAAGCGCA
AGTGCATCTTAGCGAAGCACTGTTTGATGCTGGCATTTTGCCCTATTACTTACATGTGTTGGATAAGGTTCAAGGCGCGG
CACATTTTTATGTTTCCGATCAAGAGGCCAAAGCGATTATGCACGGCTTGATCACGCAAGTGTCTGGCTATCTTGTCCCA
ACCCTGACTCGAGAAATCGGTGGCCGTCCAAGTAAAACCCCACTGGATCTCTATCTTGAATAA

Upstream 100 bases:

>100_bases
ACGCAAGGCTCGCTATCGATCATGAGTTTTAGGCCGCCTTTAAATTCATTAGTGCTAACTGTAGCCATTTTGTCCTCTTA
CATTCTTAGAGCTAAATTCA

Downstream 100 bases:

>100_bases
CTCACGCTTGTTCATTGCGTTTTCTCTGTTCTTATTTTAGGAAGCCTTTATGTCATTAACCTTAGATTCCCTACTCAGTA
TTGAGCCGTTTAGTTGGGTC

Product: Lysine 2,3-aminomutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MPHIIPRKVESVEQNWLKQLANGISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVLPVS
EEHEIHPGYSVDPLEEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPYQDNKGSKTVWQQSLDYIAQNSALNEV
IFSGGDPLMAKDDELQWLIERIADIPHIKRLRIHSRLPVVIPARITTALCQLLEQTRLQVILVTHINHANEINAELTSQL
HRLKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQEAKAIMHGLITQVSGYLVP
TLTREIGGRPSKTPLDLYLE

Sequences:

>Translated_340_residues
MPHIIPRKVESVEQNWLKQLANGISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVLPVS
EEHEIHPGYSVDPLEEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPYQDNKGSKTVWQQSLDYIAQNSALNEV
IFSGGDPLMAKDDELQWLIERIADIPHIKRLRIHSRLPVVIPARITTALCQLLEQTRLQVILVTHINHANEINAELTSQL
HRLKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQEAKAIMHGLITQVSGYLVP
TLTREIGGRPSKTPLDLYLE
>Mature_339_residues
PHIIPRKVESVEQNWLKQLANGISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVLPVSE
EHEIHPGYSVDPLEEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPYQDNKGSKTVWQQSLDYIAQNSALNEVI
FSGGDPLMAKDDELQWLIERIADIPHIKRLRIHSRLPVVIPARITTALCQLLEQTRLQVILVTHINHANEINAELTSQLH
RLKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQEAKAIMHGLITQVSGYLVPT
LTREIGGRPSKTPLDLYLE

Specific function: With YjeA might be involved in the post-translational modification of elongation factor P (EF-P) [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=340, Percent_Identity=62.6470588235294, Blast_Score=446, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022462
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 38502; Mature: 38371

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHIIPRKVESVEQNWLKQLANGISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFV
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
ERMEKRNPNDPLLRQVLPVSEEHEIHPGYSVDPLEEQDNAIPGLLHKYHNRALMIVKGGC
HHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCC
AINCRYCFRRHFPYQDNKGSKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIE
EEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
RIADIPHIKRLRIHSRLPVVIPARITTALCQLLEQTRLQVILVTHINHANEINAELTSQL
HHHCCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH
HRLKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSD
HHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECC
QEAKAIMHGLITQVSGYLVPTLTREIGGRPSKTPLDLYLE
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEC
>Mature Secondary Structure 
PHIIPRKVESVEQNWLKQLANGISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFV
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
ERMEKRNPNDPLLRQVLPVSEEHEIHPGYSVDPLEEQDNAIPGLLHKYHNRALMIVKGGC
HHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCC
AINCRYCFRRHFPYQDNKGSKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIE
EEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
RIADIPHIKRLRIHSRLPVVIPARITTALCQLLEQTRLQVILVTHINHANEINAELTSQL
HHHCCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH
HRLKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSD
HHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECC
QEAKAIMHGLITQVSGYLVPTLTREIGGRPSKTPLDLYLE
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]