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The map label for this gene is yhiD [H]

Identifier: 27364663

GI number: 27364663

Start: 1247696

End: 1248190

Strand: Reverse

Name: yhiD [H]

Synonym: VV1_1262

Alternate gene names: 27364663

Gene position: 1248190-1247696 (Counterclockwise)

Preceding gene: 27364664

Following gene: 27364659

Centisome position: 38.03

GC content: 48.69

Gene sequence:

>495_bases
ATGTCATTAACCTTAGATTCCCTACTCAGTATTGAGCCGTTTAGTTGGGTCGCCTTATTGTGCTGTGCGGTCAATGGGCT
CTTAATCGGTGCCGAGCGGCAAACTCGTGGCAAGCCAGTGGGTATTCGAACTTCTATTTTGATTATTTCTGGTACCTACT
TTTTTATGTCTATGGCGGTCTACCTCTCGCCGAATACTCTTGATCAAGCCCGTGTGCTTGGACAAATCATTACCGGTGTG
GGCTTTTTAGGTGCAGGTGTGATGATGACTCAAGATGGGAAAATTCACGGAGTAACATCCGCTGCAGTCATCTGGGTGTT
GGCGTCGATGGGAATGATGATTGGTTTAGGGCTGATGCAACAATCTGTGATCATGACGGTGCTTGCCCTGACAGTGTTGC
TCGGCGTCGACAAAGCAGAAAACCGCATTCAAGCGCTGCGCCGAGGCGTTCACCAAAAAATTCAGCAGCGCCGCAGTTCA
CGCCTGATTAAATAA

Upstream 100 bases:

>100_bases
GAAATCGGTGGCCGTCCAAGTAAAACCCCACTGGATCTCTATCTTGAATAACTCACGCTTGTTCATTGCGTTTTCTCTGT
TCTTATTTTAGGAAGCCTTT

Downstream 100 bases:

>100_bases
ACCAGTATATGGCTATCTTTGCTCACTGCTAAAAACAAAAACCCCAGACCATTATTGGCTGGGGTTTCTTTATACTATCG
AGAACTTAACTCTCGATTGA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSLTLDSLLSIEPFSWVALLCCAVNGLLIGAERQTRGKPVGIRTSILIISGTYFFMSMAVYLSPNTLDQARVLGQIITGV
GFLGAGVMMTQDGKIHGVTSAAVIWVLASMGMMIGLGLMQQSVIMTVLALTVLLGVDKAENRIQALRRGVHQKIQQRRSS
RLIK

Sequences:

>Translated_164_residues
MSLTLDSLLSIEPFSWVALLCCAVNGLLIGAERQTRGKPVGIRTSILIISGTYFFMSMAVYLSPNTLDQARVLGQIITGV
GFLGAGVMMTQDGKIHGVTSAAVIWVLASMGMMIGLGLMQQSVIMTVLALTVLLGVDKAENRIQALRRGVHQKIQQRRSS
RLIK
>Mature_163_residues
SLTLDSLLSIEPFSWVALLCCAVNGLLIGAERQTRGKPVGIRTSILIISGTYFFMSMAVYLSPNTLDQARVLGQIITGVG
FLGAGVMMTQDGKIHGVTSAAVIWVLASMGMMIGLGLMQQSVIMTVLALTVLLGVDKAENRIQALRRGVHQKIQQRRSSR
LIK

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=123, Percent_Identity=41.4634146341463, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 17704; Mature: 17572

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTLDSLLSIEPFSWVALLCCAVNGLLIGAERQTRGKPVGIRTSILIISGTYFFMSMAV
CCCCHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEEEHHHHHHHHHH
YLSPNTLDQARVLGQIITGVGFLGAGVMMTQDGKIHGVTSAAVIWVLASMGMMIGLGLMQ
HCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHH
QSVIMTVLALTVLLGVDKAENRIQALRRGVHQKIQQRRSSRLIK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLTLDSLLSIEPFSWVALLCCAVNGLLIGAERQTRGKPVGIRTSILIISGTYFFMSMAV
CCCHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEEEEEHHHHHHHHHH
YLSPNTLDQARVLGQIITGVGFLGAGVMMTQDGKIHGVTSAAVIWVLASMGMMIGLGLMQ
HCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHH
QSVIMTVLALTVLLGVDKAENRIQALRRGVHQKIQQRRSSRLIK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]