| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is yejM [H]
Identifier: 27364262
GI number: 27364262
Start: 821770
End: 823605
Strand: Reverse
Name: yejM [H]
Synonym: VV1_0813
Alternate gene names: 27364262
Gene position: 823605-821770 (Counterclockwise)
Preceding gene: 27364263
Following gene: 27364260
Centisome position: 25.1
GC content: 47.39
Gene sequence:
>1836_bases ATGTCTTTTAAGCAAAAGCTGCACGCTCACGGCTGGTTTATTCTAATTAACGCTTTGGTGTTAATGTTGATTGCCAGTCG TTATTTCGCCTTTCTGCCAGAGTTCCCGACGGATCCATTAGGCATCACCTTTATTCTTGCTGGTACTTGGGGGCAGATGA CGCTGCTTGCTGCGCTCATTGGTTTGGTGACCATTCCCACCTTATTTTTGCCGAAACCATTTCGTAATGGTACCCAAGCT CTAATTGCTTCGTTAGGCGTCGCGACTTTGTTTATTGATACCATCGTGTTTGCACAGTATCGATTCCATATTAATGCGGT GGTGCTAGAGCTCGTGATGTCGGGGCAAATTGTTAGCTTTCCGTTGATCACTTGGTTAATGGTGATTGGCGGTGTTGCTT TGTTGTTGGCCGCTCAGTGGTGGACAATTCGCTGGCTAGAAAATGGTGCACCCGTCAGAGCGCTGAAACTTGGCCGCAAA TTTGCGTTGTTGACCTTTGCTGCGCTACTGGCCACCAATGCGATTCATATTTGGGCCGCAGCGCATGCCTATCAACCGGT GACCACGGTGAAGCGCTATTTACCGCTGTTTTATCCTGCTACAGCAGATAAATTTATGCGCAAACAAGGTTGGGTGGATG AAGAGGCGCTTGAGCGTCAAAAGGCACTGGCGTTTAAACGCAAAAATGATTTGAATTACCCATTAGCACCACTTCAAACA CAACCTGTAGAGAAACCGCTCAATATTATGTTGCTGGTGGTGGATTCTTGGCGTGCCGATACCTTCAACGCAGACAATAC GCCAAACATGTGGAAATACGCGCAGTCGGGTGTGGTTTTCAATAATCACATCGCGACAGGCAACGCGACTCGTACAGGTA TCTTTGGTCTTTTCTACGGCATTCCGGGCACCTACTGGCATGGCTTCTTAGCAAACCAACAAAGCCCGGTACTGATCGAC CGTCTACAGGCTCTGGACTACCAATTAGGTATTTTCACTGCCGCTCAGTTGCGTAAACCGGAATTCAATCAAACGGTTTT CACCAAAGTGGAAAACTTACGTATTGGCTCTGAAGGTGGTCGCCCGTCTGAGCTGGATGCTAACCTCACTCAAGATTGGT TAGCTTGGTACGATCAACGTGATAAGTCGAAGCCAACGTTCTCTTTCTTGTTTTACGATGCGCCACATGGCTACGATTTC CCTGCAGATTTTGAGCCGAAATACGAACCGATACTCAAAGAGGTGAATTATCTCAAGCTGCACAACGACACGGATCCGAC GCCATTTTTCAATCGCTACAAAACCAGTGTGCGTTATGTCGATTCAATGGCAACAAAAGTGCTCGATAAACTCAAAGAGA GTGGCGATCTGGAAAACACCTTGGTGATCATTACCGGTGACCATGGGCAAGAGATGAATGACAACAAACTCAACTTCTGG GGGCACAACAGCAACTTTACCGATGCGCAGGTCAACGTGCCGTTTGCTATCTTTGGCCCTGGCGTTGATGCGGCGAAGAT GCAGTGGAGTAGCGAAGCGCTCACTAGCCACCAAGATGTTGTACCGACGTTGATGAAGCACTATCTCGGGGTGACCAACG ATGTGAAAGATTACTCGGTTGGCGAAGATTTACTCGGTGATGCAGTAAAACGTGATTGGATCATTTCCTCAAACTACAGC GGTTATGCCATTATTACCGATGACAATATCCTAGAAGTGAGTGGCGGTGGCCAGTACCAATTTATGGACAAAACCAATCG CCAGTTGAAAGATCAACAACCGAATTTTACCTATCTGCAGCAAGCCTTAGAGCAGATCAGTCGATTTAGTCGATAG
Upstream 100 bases:
>100_bases ACTGGCACGACAAAGATTTTCACGCCTTACTGACAGGCTACGAAAGTCAACAATAATCGCTATTCTCATTAATAGACGTA AGTCTCAGGAAGTTAGTTAC
Downstream 100 bases:
>100_bases AGTCGAGGGGTTACCAATCTGGCAACTCTGCATAAGGTAACCCAATTTCTTTTCTTAATGATTCCAAAGTTTCCCCAAGT AATGGCATTTCGTATTTTTC
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MSFKQKLHAHGWFILINALVLMLIASRYFAFLPEFPTDPLGITFILAGTWGQMTLLAALIGLVTIPTLFLPKPFRNGTQA LIASLGVATLFIDTIVFAQYRFHINAVVLELVMSGQIVSFPLITWLMVIGGVALLLAAQWWTIRWLENGAPVRALKLGRK FALLTFAALLATNAIHIWAAAHAYQPVTTVKRYLPLFYPATADKFMRKQGWVDEEALERQKALAFKRKNDLNYPLAPLQT QPVEKPLNIMLLVVDSWRADTFNADNTPNMWKYAQSGVVFNNHIATGNATRTGIFGLFYGIPGTYWHGFLANQQSPVLID RLQALDYQLGIFTAAQLRKPEFNQTVFTKVENLRIGSEGGRPSELDANLTQDWLAWYDQRDKSKPTFSFLFYDAPHGYDF PADFEPKYEPILKEVNYLKLHNDTDPTPFFNRYKTSVRYVDSMATKVLDKLKESGDLENTLVIITGDHGQEMNDNKLNFW GHNSNFTDAQVNVPFAIFGPGVDAAKMQWSSEALTSHQDVVPTLMKHYLGVTNDVKDYSVGEDLLGDAVKRDWIISSNYS GYAIITDDNILEVSGGGQYQFMDKTNRQLKDQQPNFTYLQQALEQISRFSR
Sequences:
>Translated_611_residues MSFKQKLHAHGWFILINALVLMLIASRYFAFLPEFPTDPLGITFILAGTWGQMTLLAALIGLVTIPTLFLPKPFRNGTQA LIASLGVATLFIDTIVFAQYRFHINAVVLELVMSGQIVSFPLITWLMVIGGVALLLAAQWWTIRWLENGAPVRALKLGRK FALLTFAALLATNAIHIWAAAHAYQPVTTVKRYLPLFYPATADKFMRKQGWVDEEALERQKALAFKRKNDLNYPLAPLQT QPVEKPLNIMLLVVDSWRADTFNADNTPNMWKYAQSGVVFNNHIATGNATRTGIFGLFYGIPGTYWHGFLANQQSPVLID RLQALDYQLGIFTAAQLRKPEFNQTVFTKVENLRIGSEGGRPSELDANLTQDWLAWYDQRDKSKPTFSFLFYDAPHGYDF PADFEPKYEPILKEVNYLKLHNDTDPTPFFNRYKTSVRYVDSMATKVLDKLKESGDLENTLVIITGDHGQEMNDNKLNFW GHNSNFTDAQVNVPFAIFGPGVDAAKMQWSSEALTSHQDVVPTLMKHYLGVTNDVKDYSVGEDLLGDAVKRDWIISSNYS GYAIITDDNILEVSGGGQYQFMDKTNRQLKDQQPNFTYLQQALEQISRFSR >Mature_610_residues SFKQKLHAHGWFILINALVLMLIASRYFAFLPEFPTDPLGITFILAGTWGQMTLLAALIGLVTIPTLFLPKPFRNGTQAL IASLGVATLFIDTIVFAQYRFHINAVVLELVMSGQIVSFPLITWLMVIGGVALLLAAQWWTIRWLENGAPVRALKLGRKF ALLTFAALLATNAIHIWAAAHAYQPVTTVKRYLPLFYPATADKFMRKQGWVDEEALERQKALAFKRKNDLNYPLAPLQTQ PVEKPLNIMLLVVDSWRADTFNADNTPNMWKYAQSGVVFNNHIATGNATRTGIFGLFYGIPGTYWHGFLANQQSPVLIDR LQALDYQLGIFTAAQLRKPEFNQTVFTKVENLRIGSEGGRPSELDANLTQDWLAWYDQRDKSKPTFSFLFYDAPHGYDFP ADFEPKYEPILKEVNYLKLHNDTDPTPFFNRYKTSVRYVDSMATKVLDKLKESGDLENTLVIITGDHGQEMNDNKLNFWG HNSNFTDAQVNVPFAIFGPGVDAAKMQWSSEALTSHQDVVPTLMKHYLGVTNDVKDYSVGEDLLGDAVKRDWIISSNYSG YAIITDDNILEVSGGGQYQFMDKTNRQLKDQQPNFTYLQQALEQISRFSR
Specific function: Unknown
COG id: COG3083
COG function: function code R; Predicted hydrolase of alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0842 [H]
Homologues:
Organism=Escherichia coli, GI1788515, Length=610, Percent_Identity=28.8524590163934, Blast_Score=244, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012159 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 69128; Mature: 68997
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKQKLHAHGWFILINALVLMLIASRYFAFLPEFPTDPLGITFILAGTWGQMTLLAALI CCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH GLVTIPTLFLPKPFRNGTQALIASLGVATLFIDTIVFAQYRFHINAVVLELVMSGQIVSF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH PLITWLMVIGGVALLLAAQWWTIRWLENGAPVRALKLGRKFALLTFAALLATNAIHIWAA HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHCCHHHHHHHHHHHHCCHHEEEEH AHAYQPVTTVKRYLPLFYPATADKFMRKQGWVDEEALERQKALAFKRKNDLNYPLAPLQT HHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC QPVEKPLNIMLLVVDSWRADTFNADNTPNMWKYAQSGVVFNNHIATGNATRTGIFGLFYG CCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHCCEEEECEECCCCCCHHHHHHHHHC IPGTYWHGFLANQQSPVLIDRLQALDYQLGIFTAAQLRKPEFNQTVFTKVENLRIGSEGG CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCC RPSELDANLTQDWLAWYDQRDKSKPTFSFLFYDAPHGYDFPADFEPKYEPILKEVNYLKL CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHCCCEEEE HNDTDPTPFFNRYKTSVRYVDSMATKVLDKLKESGDLENTLVIITGDHGQEMNDNKLNFW ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEE GHNSNFTDAQVNVPFAIFGPGVDAAKMQWSSEALTSHQDVVPTLMKHYLGVTNDVKDYSV ECCCCCCCCEEECCEEEECCCCCHHHHCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCC GEDLLGDAVKRDWIISSNYSGYAIITDDNILEVSGGGQYQFMDKTNRQLKDQQPNFTYLQ CHHHHHHHHHCCEEEECCCCCEEEEECCCEEEECCCCCEEECCHHHHHHHCCCCCHHHHH QALEQISRFSR HHHHHHHHHCC >Mature Secondary Structure SFKQKLHAHGWFILINALVLMLIASRYFAFLPEFPTDPLGITFILAGTWGQMTLLAALI CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH GLVTIPTLFLPKPFRNGTQALIASLGVATLFIDTIVFAQYRFHINAVVLELVMSGQIVSF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH PLITWLMVIGGVALLLAAQWWTIRWLENGAPVRALKLGRKFALLTFAALLATNAIHIWAA HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHCCHHHHHHHHHHHHCCHHEEEEH AHAYQPVTTVKRYLPLFYPATADKFMRKQGWVDEEALERQKALAFKRKNDLNYPLAPLQT HHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC QPVEKPLNIMLLVVDSWRADTFNADNTPNMWKYAQSGVVFNNHIATGNATRTGIFGLFYG CCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHCCEEEECEECCCCCCHHHHHHHHHC IPGTYWHGFLANQQSPVLIDRLQALDYQLGIFTAAQLRKPEFNQTVFTKVENLRIGSEGG CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCC RPSELDANLTQDWLAWYDQRDKSKPTFSFLFYDAPHGYDFPADFEPKYEPILKEVNYLKL CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHCCCEEEE HNDTDPTPFFNRYKTSVRYVDSMATKVLDKLKESGDLENTLVIITGDHGQEMNDNKLNFW ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEE GHNSNFTDAQVNVPFAIFGPGVDAAKMQWSSEALTSHQDVVPTLMKHYLGVTNDVKDYSV ECCCCCCCCEEECCEEEECCCCCHHHHCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCC GEDLLGDAVKRDWIISSNYSGYAIITDDNILEVSGGGQYQFMDKTNRQLKDQQPNFTYLQ CHHHHHHHHHCCEEEECCCCCEEEEECCCEEEECCCCCEEECCHHHHHHHCCCCCHHHHH QALEQISRFSR HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]