| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is tusA [H]
Identifier: 255961267
GI number: 255961267
Start: 4397964
End: 4398215
Strand: Reverse
Name: tusA [H]
Synonym: Pfl01_3888
Alternate gene names: 255961267
Gene position: 4398215-4397964 (Counterclockwise)
Preceding gene: 255961266
Following gene: 77460107
Centisome position: 68.31
GC content: 59.52
Gene sequence:
>252_bases ATGAGTGAAATGATCAATACGCCGGTCGACGGCACCCTTGACGCCACGGGCCTCAACTGCCCGGAGCCGGTGATGATGCT GCACCAGCACATCCGTGATTTGGTGCCTGGCGGCCTGCTCAAGGTGATCGCCACCGACCCGTCGACCCGCCGCGACATCC CCAAGTTCTGCGTGTTTCTCGACCATGAACTGGTAGGGCAACACGAAGAAGCCGGGACCTATCTGTACTGGATTCGCAAG AAGTCCGGTTGA
Upstream 100 bases:
>100_bases GCCGCCTTGACGTGAAGAAAGCCAAAGCCCGCTGAGCGCACGACAGGTGACCGAAGACCCAGCATTGGGCGACAATGCCG GCCAGTTTCAGGAGTGAATC
Downstream 100 bases:
>100_bases TCGGAAGGCAAAAAAAAGACCTGCATGTGCAGGTCATTTTTTATGGCCGGTCAGCCCATCGAACGGCTGATGCGAATGCG TTTGCGTGCACTGCGCGTCA
Product: sulfur transfer protein SirA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSEMINTPVDGTLDATGLNCPEPVMMLHQHIRDLVPGGLLKVIATDPSTRRDIPKFCVFLDHELVGQHEEAGTYLYWIRK KSG
Sequences:
>Translated_83_residues MSEMINTPVDGTLDATGLNCPEPVMMLHQHIRDLVPGGLLKVIATDPSTRRDIPKFCVFLDHELVGQHEEAGTYLYWIRK KSG >Mature_82_residues SEMINTPVDGTLDATGLNCPEPVMMLHQHIRDLVPGGLLKVIATDPSTRRDIPKFCVFLDHELVGQHEEAGTYLYWIRKK SG
Specific function: Could be part of a sulfur-relay system [H]
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0033 family. TusA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789881, Length=80, Percent_Identity=51.25, Blast_Score=89, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001455 - InterPro: IPR022931 [H]
Pfam domain/function: PF01206 SirA [H]
EC number: NA
Molecular weight: Translated: 9305; Mature: 9174
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMINTPVDGTLDATGLNCPEPVMMLHQHIRDLVPGGLLKVIATDPSTRRDIPKFCVFL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHH DHELVGQHEEAGTYLYWIRKKSG CHHHHCCCCCCCEEEEEEEECCC >Mature Secondary Structure SEMINTPVDGTLDATGLNCPEPVMMLHQHIRDLVPGGLLKVIATDPSTRRDIPKFCVFL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHH DHELVGQHEEAGTYLYWIRKKSG CHHHHCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA