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The map label for this gene is yxjC

Identifier: 255767822

GI number: 255767822

Start: 4002716

End: 4004134

Strand: Reverse

Name: yxjC

Synonym: BSU39000

Alternate gene names: 255767822

Gene position: 4004134-4002716 (Counterclockwise)

Preceding gene: 16080952

Following gene: 16080950

Centisome position: 94.98

GC content: 49.33

Gene sequence:

>1419_bases
GTGGAACTGATCATCATTCTATTGGCGTTAGGTTTGCTGATGTTTACGGCGTATCGGGGATTTTCTGTCATATTGTTTGC
GCCGATTTGCGCGTTATTCGCGGTGCTGCTGACAGATCCAAGCCATGTGCTTCCTTTTTTTTCATCAATTTTTATGGAGA
AGATGGCGGGTTTTATTAAGCTGTATTTCCCAGTGTTTTTGCTCGGTGCTATTTTTGGAAAGGTCGTTGAAATGGCCGGG
CTTGCGGCATCAATCGCGAAAACAATTGTCCGGCTTGTCGGGGCAAAAAGAGCGATACTTGCCATTGTGCTGATGGGTGC
TGTCTTGACGTACAGCGGTGTCAGCCTGTTTGTTGTCGTATTTGCTGTATATCCTTTTGCGAAAAACATGTTCCAAGAAG
CAAACATACCAAAACGCCTCATCCCGGGTACGATTGCTTTAGGAGCTTTTACGTTTACGATGGACGCACTTCCGGGAACG
CCGCAAATCCAAAATGTCATCCCGACGTCGTTTTTCAAAACAGACATTTATGCCGCCCCTTGGCTGGGTTTGATGGGCGC
AGTGATTGTGCTGGCAGCTGGGATGCTCTATTTGGAATCAAGGCGGAAGAAAGCGCAGGCATCTGGCGAAGGCTATGGCG
GTTTTGATTCGCAGAATGCTCCTGCTCCTGAATCGATTGAGTCCGCGGCTGAACCGGACAAAAGCCCGATTCGGCACGCG
CTTGCCTTTGTCCCGCTTATTCTCGTCGGTGCAGTGAATAAATATTTCACCATTTACCTGCCAAAGTGGTATCCGAATGG
ATTTGATTTTTCTTCCATAGGATTAAAGGAGTTCGGCAGGCTTGATATTTCTTCAGCGGCTGCTATTTGGTCGGTGGAGA
TTGCTTTAGTGATTGGCATCATCACAACGATATTATTTGATTGGAGAAGTGTGTTTGCCCAATTGAAGGAAGGGCTGAAT
GAAGGAATTGGCGGCGCCTTGCTGGCATCTATGAATACGGGTGCTGAGTACGGGTTCGGCGGCATTATCGCCGCGCTGCC
GGGGTTTCATAAGCTGAGCAGCGGAATTTCACATACTTTTACCGATCCGCTTGTAAATGGCGCCGTTACGACAACTGCGC
TGGCGGGAATCACCGGCTCGGCTTCGGGAGGAATGGGCATTGCGTTAAGCGCGATGTCAGAACAATACTTACAGGCGATT
CAGGCTTACAATATTCCGCCAGAGGTGATGCATCGGGTCATTTCAATGGCATCAGGCGGGATGGATACACTGCCGCATAA
TGGCGCCGTTATCACGCTTCTGGCCGTGACGGGTTTGACCCACCGGCAATCCTATCGCGATATTTTTGCGATCACGCTCA
TTAAAACGGCTGCCGTATTTGCTGTGATCGCGATTTACAGCCTGACTGGTCTAGTGTAG

Upstream 100 bases:

>100_bases
TGGCCCACGCTTCTCGTACATATGGAAAGGGGACGGAAACAGCCGATGCGGACAGGTTTTTGTAAACGCTTTCTAGTTCG
CGGAAACGGGGGATGTGTGT

Downstream 100 bases:

>100_bases
AAGAAAACGAAAGGGGCATCAATATGGGAAAAGTGCTGTCATCAAGCAAGGAAGCTGCGAAACTGATTCATGATGGGGAT
ACGCTGATCGCGGGAGGGTT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MELIIILLALGLLMFTAYRGFSVILFAPICALFAVLLTDPSHVLPFFSSIFMEKMAGFIKLYFPVFLLGAIFGKVVEMAG
LAASIAKTIVRLVGAKRAILAIVLMGAVLTYSGVSLFVVVFAVYPFAKNMFQEANIPKRLIPGTIALGAFTFTMDALPGT
PQIQNVIPTSFFKTDIYAAPWLGLMGAVIVLAAGMLYLESRRKKAQASGEGYGGFDSQNAPAPESIESAAEPDKSPIRHA
LAFVPLILVGAVNKYFTIYLPKWYPNGFDFSSIGLKEFGRLDISSAAAIWSVEIALVIGIITTILFDWRSVFAQLKEGLN
EGIGGALLASMNTGAEYGFGGIIAALPGFHKLSSGISHTFTDPLVNGAVTTTALAGITGSASGGMGIALSAMSEQYLQAI
QAYNIPPEVMHRVISMASGGMDTLPHNGAVITLLAVTGLTHRQSYRDIFAITLIKTAAVFAVIAIYSLTGLV

Sequences:

>Translated_472_residues
MELIIILLALGLLMFTAYRGFSVILFAPICALFAVLLTDPSHVLPFFSSIFMEKMAGFIKLYFPVFLLGAIFGKVVEMAG
LAASIAKTIVRLVGAKRAILAIVLMGAVLTYSGVSLFVVVFAVYPFAKNMFQEANIPKRLIPGTIALGAFTFTMDALPGT
PQIQNVIPTSFFKTDIYAAPWLGLMGAVIVLAAGMLYLESRRKKAQASGEGYGGFDSQNAPAPESIESAAEPDKSPIRHA
LAFVPLILVGAVNKYFTIYLPKWYPNGFDFSSIGLKEFGRLDISSAAAIWSVEIALVIGIITTILFDWRSVFAQLKEGLN
EGIGGALLASMNTGAEYGFGGIIAALPGFHKLSSGISHTFTDPLVNGAVTTTALAGITGSASGGMGIALSAMSEQYLQAI
QAYNIPPEVMHRVISMASGGMDTLPHNGAVITLLAVTGLTHRQSYRDIFAITLIKTAAVFAVIAIYSLTGLV
>Mature_472_residues
MELIIILLALGLLMFTAYRGFSVILFAPICALFAVLLTDPSHVLPFFSSIFMEKMAGFIKLYFPVFLLGAIFGKVVEMAG
LAASIAKTIVRLVGAKRAILAIVLMGAVLTYSGVSLFVVVFAVYPFAKNMFQEANIPKRLIPGTIALGAFTFTMDALPGT
PQIQNVIPTSFFKTDIYAAPWLGLMGAVIVLAAGMLYLESRRKKAQASGEGYGGFDSQNAPAPESIESAAEPDKSPIRHA
LAFVPLILVGAVNKYFTIYLPKWYPNGFDFSSIGLKEFGRLDISSAAAIWSVEIALVIGIITTILFDWRSVFAQLKEGLN
EGIGGALLASMNTGAEYGFGGIIAALPGFHKLSSGISHTFTDPLVNGAVTTTALAGITGSASGGMGIALSAMSEQYLQAI
QAYNIPPEVMHRVISMASGGMDTLPHNGAVITLLAVTGLTHRQSYRDIFAITLIKTAAVFAVIAIYSLTGLV

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXJC_BACSU (P42314)

Other databases:

- EMBL:   D83026
- EMBL:   AL009126
- PIR:   A70079
- RefSeq:   NP_391779.3
- EnsemblBacteria:   EBBACT00000000070
- GeneID:   937455
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39000
- GenoList:   BSU39000
- GeneTree:   EBGT00050000001371
- HOGENOM:   HBG289343
- ProtClustDB:   CLSK2793866
- BioCyc:   BSUB:BSU39000-MONOMER
- InterPro:   IPR004680

Pfam domain/function: PF03600 CitMHS

EC number: NA

Molecular weight: Translated: 50132; Mature: 50132

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe224250)-; HASH(0x12e2d548)-; HASH(0x130fabec)-; HASH(0x13572778)-; HASH(0x138b1484)-; HASH(0x1355b624)-; HASH(0x1355c748)-; HASH(0x134bf898)-; HASH(0x13146884)-; HASH(0x138ae904)-; HASH(0xf46c1a4)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure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CCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 10568751