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The map label for this gene is rsoA

Identifier: 255767759

GI number: 255767759

Start: 3409219

End: 3409458

Strand: Reverse

Name: rsoA

Synonym: BSU33222

Alternate gene names: 255767759

Gene position: 3409458-3409219 (Counterclockwise)

Preceding gene: 255767760

Following gene: 255767758

Centisome position: 80.88

GC content: 37.92

Gene sequence:

>240_bases
GTGGACGGCCAGTTTGAACAAAAAAAGAAACAAAAAGACGAGACTTATGACATTGAGCACCTGATTGCATGCTTTTCACC
GATGATCAGAAAAAAACTCAGCAATACGTCCTATCAAGAAAGAGAAGATTTAGAGCAAGAGCTGAAGATCAAAATGTTTG
AAAAGGCTGATATGCTTTTATGTCAGGATGTACCGGGGTTTTGGGAGTTTATTTTGTACATGGTAGATGAGAACTCATAA

Upstream 100 bases:

>100_bases
ATTAGGGGAGTCCCGACAAAACATCTCCAACATTCATAAAAAGGGGCTGGAGAATATCAGAAAGCAGTTAGCGGCGCAAA
AAAAGGGGGAAAAGTAAGCT

Downstream 100 bases:

>100_bases
TATTTTCATATGAAAAAACATCAAAAGGGAGCGCTTGTTTGCTCCTTTTTTGCTGTTTTGATTTGCCAAGGCTCCAATGT
ATTCAAAAATGTACCATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MDGQFEQKKKQKDETYDIEHLIACFSPMIRKKLSNTSYQEREDLEQELKIKMFEKADMLLCQDVPGFWEFILYMVDENS

Sequences:

>Translated_79_residues
MDGQFEQKKKQKDETYDIEHLIACFSPMIRKKLSNTSYQEREDLEQELKIKMFEKADMLLCQDVPGFWEFILYMVDENS
>Mature_79_residues
MDGQFEQKKKQKDETYDIEHLIACFSPMIRKKLSNTSYQEREDLEQELKIKMFEKADMLLCQDVPGFWEFILYMVDENS

Specific function: Together with RNA polymerase sigma factor sigO, positively regulates the expression of at least three operons, including oxdC-yvrL, sigO-rsoA and yvrJ. Required for the acid stress-dependent induction of the oxalate decarboxylase oxdC

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSOA_BACSU (C0H3R4)

Other databases:

- EMBL:   AL009126
- RefSeq:   YP_003097787.1
- DIP:   DIP-49020N
- EnsemblBacteria:   EBBACT00000082715
- GeneID:   8302938
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33222
- GenoList:   BSU33222
- GeneTree:   EBGT00050000003042
- ProtClustDB:   PRK14082
- BioCyc:   BSUB:BSU33222-MONOMER
- GO:   GO:0006350

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9546; Mature: 9546

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGQFEQKKKQKDETYDIEHLIACFSPMIRKKLSNTSYQEREDLEQELKIKMFEKADMLL
CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
CQDVPGFWEFILYMVDENS
HCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MDGQFEQKKKQKDETYDIEHLIACFSPMIRKKLSNTSYQEREDLEQELKIKMFEKADMLL
CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
CQDVPGFWEFILYMVDENS
HCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377