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The map label for this gene is ytbQ

Identifier: 255767693

GI number: 255767693

Start: 3088388

End: 3089149

Strand: Reverse

Name: ytbQ

Synonym: BSU30180

Alternate gene names: 255767693

Gene position: 3089149-3088388 (Counterclockwise)

Preceding gene: 16080071

Following gene: 16080069

Centisome position: 73.28

GC content: 45.41

Gene sequence:

>762_bases
GTGAAAAAAGTGCTGATCGCCGGCGGAAATGGTGTGATTGGGAGACTGCTTGCTGAAGGGCTTATTTCAGACTATGAAGT
GACTGTGCTTGATAAAGATCATTTCGATGGCAAAGCCTCTTCCATTCAGGCTGACGCGGCAAATTATGAGGAGCTGTTGA
AGAAGATTCCAAAAGATACCGATGCCATCTTGAATTTACTCGCTGTGAAAATCAAATACGATATTATGGACATCGCTGAG
TTTGAAAAAATGACGGATGTTTTCTATAGGGCAAGCTATTATCTGTGCCGTGCGGCAGCGGAGCTCGGCATTCAAAAGCT
CGTGTTCGCCAGCAGCAATCATGTCACAGATGTATATGAAAAAGACGGGCGCTCGCTCTTAGGACGGGAAATCACAACAA
GCGATTATCCGCTGTCAAAAAACTTGTACGGTGTATTAAAGCTGACCTCTGAACAGATCGGCCATTTGTTTTATTTGGAA
AATAAGCTATCAGTAATCAACCTTCGAATCGGAACAGTCGTGACAGATGAAATGGATACGCTGCATGAAAAAGAACGGAC
GAAAAAGACACTGCTTTCTCACCCCGATCTGCTGTCGATTTTCAAAGCCGCCATTGAGACCAACATCCGGTATGGCACTT
ATTACGCCGTCTCTGATAATCCGGGCCGGCCATGGTCCATTGAATCTGCCGTGAATGAACTTGGGTTTTCGCCACAAATC
AATACGGCTGAACTTCTGAACGAGGAGGAGAACGGAGCATAA

Upstream 100 bases:

>100_bases
GAGCTGCCGGTGACTTTTGAATAAGCCTAAGAATGTGAGTGCCAAAAAAGTGTCAGCCCCGCCGAAAATGGGCAATCTAT
AAAAAAGGGGAGTGAACATC

Downstream 100 bases:

>100_bases
TCATTTTCTAAGATTATGCTCTTTTTCTTTTGTTATCGGTCTCAATTCGCGGCAGCCCCCGCCCGGCCGGGGACACTGTT
CAAATGATTATAGACATGGC

Product: nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKKVLIAGGNGVIGRLLAEGLISDYEVTVLDKDHFDGKASSIQADAANYEELLKKIPKDTDAILNLLAVKIKYDIMDIAE
FEKMTDVFYRASYYLCRAAAELGIQKLVFASSNHVTDVYEKDGRSLLGREITTSDYPLSKNLYGVLKLTSEQIGHLFYLE
NKLSVINLRIGTVVTDEMDTLHEKERTKKTLLSHPDLLSIFKAAIETNIRYGTYYAVSDNPGRPWSIESAVNELGFSPQI
NTAELLNEEENGA

Sequences:

>Translated_253_residues
MKKVLIAGGNGVIGRLLAEGLISDYEVTVLDKDHFDGKASSIQADAANYEELLKKIPKDTDAILNLLAVKIKYDIMDIAE
FEKMTDVFYRASYYLCRAAAELGIQKLVFASSNHVTDVYEKDGRSLLGREITTSDYPLSKNLYGVLKLTSEQIGHLFYLE
NKLSVINLRIGTVVTDEMDTLHEKERTKKTLLSHPDLLSIFKAAIETNIRYGTYYAVSDNPGRPWSIESAVNELGFSPQI
NTAELLNEEENGA
>Mature_253_residues
MKKVLIAGGNGVIGRLLAEGLISDYEVTVLDKDHFDGKASSIQADAANYEELLKKIPKDTDAILNLLAVKIKYDIMDIAE
FEKMTDVFYRASYYLCRAAAELGIQKLVFASSNHVTDVYEKDGRSLLGREITTSDYPLSKNLYGVLKLTSEQIGHLFYLE
NKLSVINLRIGTVVTDEMDTLHEKERTKKTLLSHPDLLSIFKAAIETNIRYGTYYAVSDNPGRPWSIESAVNELGFSPQI
NTAELLNEEENGA

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTBQ_BACSU (P53560)

Other databases:

- EMBL:   U51868
- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   F69988
- RefSeq:   NP_390896.2
- ProteinModelPortal:   P53560
- SMR:   P53560
- EnsemblBacteria:   EBBACT00000001903
- GeneID:   937270
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30180
- NMPDR:   fig|224308.1.peg.3021
- GenoList:   BSU30180
- GeneTree:   EBGT00050000000682
- HOGENOM:   HBG344757
- ProtClustDB:   CLSK887746
- BioCyc:   BSUB:BSU30180-MONOMER
- InterPro:   IPR001509
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720

Pfam domain/function: PF01370 Epimerase

EC number: NA

Molecular weight: Translated: 28233; Mature: 28233

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLIAGGNGVIGRLLAEGLISDYEVTVLDKDHFDGKASSIQADAANYEELLKKIPKDT
CCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCH
DAILNLLAVKIKYDIMDIAEFEKMTDVFYRASYYLCRAAAELGIQKLVFASSNHVTDVYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCHHHHH
KDGRSLLGREITTSDYPLSKNLYGVLKLTSEQIGHLFYLENKLSVINLRIGTVVTDEMDT
HCCHHHHCCCCCCCCCCCCCCHHHHEEECHHHHCEEEEEECCEEEEEEEECEEECCHHHH
LHEKERTKKTLLSHPDLLSIFKAAIETNIRYGTYYAVSDNPGRPWSIESAVNELGFSPQI
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEHHHHHHHCCCCCCC
NTAELLNEEENGA
CHHHHHCCCCCCC
>Mature Secondary Structure
MKKVLIAGGNGVIGRLLAEGLISDYEVTVLDKDHFDGKASSIQADAANYEELLKKIPKDT
CCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCH
DAILNLLAVKIKYDIMDIAEFEKMTDVFYRASYYLCRAAAELGIQKLVFASSNHVTDVYE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCHHHHH
KDGRSLLGREITTSDYPLSKNLYGVLKLTSEQIGHLFYLENKLSVINLRIGTVVTDEMDT
HCCHHHHCCCCCCCCCCCCCCHHHHEEECHHHHCEEEEEECCEEEEEEEECEEECCHHHH
LHEKERTKKTLLSHPDLLSIFKAAIETNIRYGTYYAVSDNPGRPWSIESAVNELGFSPQI
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEHHHHHHHCCCCCCC
NTAELLNEEENGA
CHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763940; 9387221; 9384377