Click here to switch to the map view.

The map label for this gene is ytmP

Identifier: 255767685

GI number: 255767685

Start: 3060674

End: 3061288

Strand: Reverse

Name: ytmP

Synonym: BSU29920

Alternate gene names: 255767685

Gene position: 3061288-3060674 (Counterclockwise)

Preceding gene: 255767686

Following gene: 16080042

Centisome position: 72.62

GC content: 47.48

Gene sequence:

>615_bases
ATGGAAAATGGGGACGTCATTACGGCCCAGCACTGGATGACCGGCAGAGAGCTGAAGCCTAAAGACATGAGCGGACGGCC
CGTTGCTGAATTGCTTCGTAAAATACACACATCAAAAGCCTTGCTGGACATGCTGAAGAGACTTGGAAAAGAACCGCTGA
ACCCGGGGGCTCTTTTGTCTCAGCTGAAGCAGGCTGTATTTGCTGTGCAGCAATCTTCGCCGCTGATTCAAGAAGGGATC
AAGTATTTGGAAGAACACCTGCATGAAGTGCATTTCGGTGAGAAAGTCGTTTGCCATTGTGATGTCAATCATAATAACTG
GCTATTGTCTGAAGACAACCAGCTGTATTTAATTGACTGGGACGGCGCCATGATCGCTGATCCGGCGATGGACCTCGGGC
CTTTGCTGTACCACTACGTCGAAAAGCCAGCTTGGGAGAGCTGGCTGAGCATGTACGGCATAGAGCTGACAGAAAGCCTT
CGGTTGCGAATGGCTTGGTATGTGTTATCTGAAACAATTACTTTCATTGCCTGGCATAAAGCAAAAGGCAATGATAAGGA
ATTTCATGATGCAATGGAAGAGCTGCATATCCTCATGAAACGAATTGTTGATTAA

Upstream 100 bases:

>100_bases
ACATAACGGGCAGCAGCTTTTTTTAAAACGTAATAGCTCACCTTTTTTAGCTGTTTTATCCGCCGAAGGCATTGTTCCGA
AGCTGGTTTGGACAAAACGG

Downstream 100 bases:

>100_bases
TCAGGAATACGAATCCATTTGCTCTACCCATTGAGACAGGCTGTTCTGATGCTCTTGTATGTGTGAGTCGATGGATTTGG
ACGATATTCCTGATTGGCTG

Product: kinase/phosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MENGDVITAQHWMTGRELKPKDMSGRPVAELLRKIHTSKALLDMLKRLGKEPLNPGALLSQLKQAVFAVQQSSPLIQEGI
KYLEEHLHEVHFGEKVVCHCDVNHNNWLLSEDNQLYLIDWDGAMIADPAMDLGPLLYHYVEKPAWESWLSMYGIELTESL
RLRMAWYVLSETITFIAWHKAKGNDKEFHDAMEELHILMKRIVD

Sequences:

>Translated_204_residues
MENGDVITAQHWMTGRELKPKDMSGRPVAELLRKIHTSKALLDMLKRLGKEPLNPGALLSQLKQAVFAVQQSSPLIQEGI
KYLEEHLHEVHFGEKVVCHCDVNHNNWLLSEDNQLYLIDWDGAMIADPAMDLGPLLYHYVEKPAWESWLSMYGIELTESL
RLRMAWYVLSETITFIAWHKAKGNDKEFHDAMEELHILMKRIVD
>Mature_204_residues
MENGDVITAQHWMTGRELKPKDMSGRPVAELLRKIHTSKALLDMLKRLGKEPLNPGALLSQLKQAVFAVQQSSPLIQEGI
KYLEEHLHEVHFGEKVVCHCDVNHNNWLLSEDNQLYLIDWDGAMIADPAMDLGPLLYHYVEKPAWESWLSMYGIELTESL
RLRMAWYVLSETITFIAWHKAKGNDKEFHDAMEELHILMKRIVD

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTMP_BACSU (C0SPC1)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   A69997
- RefSeq:   NP_390870.2
- ProteinModelPortal:   C0SPC1
- SMR:   C0SPC1
- EnsemblBacteria:   EBBACT00000001645
- GeneID:   936622
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29920
- NMPDR:   fig|224308.1.peg.2995
- GenoList:   BSU29920
- GeneTree:   EBGT00050000001927
- BioCyc:   BSUB:BSU29920-MONOMER
- InterPro:   IPR002575
- InterPro:   IPR011009

Pfam domain/function: PF01636 APH; SSF56112 Kinase_like

EC number: NA

Molecular weight: Translated: 23586; Mature: 23586

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: ACT_SITE 101-101

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENGDVITAQHWMTGRELKPKDMSGRPVAELLRKIHTSKALLDMLKRLGKEPLNPGALLS
CCCCCEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QLKQAVFAVQQSSPLIQEGIKYLEEHLHEVHFGEKVVCHCDVNHNNWLLSEDNQLYLIDW
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCEEEEEEC
DGAMIADPAMDLGPLLYHYVEKPAWESWLSMYGIELTESLRLRMAWYVLSETITFIAWHK
CCCEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
AKGNDKEFHDAMEELHILMKRIVD
CCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MENGDVITAQHWMTGRELKPKDMSGRPVAELLRKIHTSKALLDMLKRLGKEPLNPGALLS
CCCCCEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QLKQAVFAVQQSSPLIQEGIKYLEEHLHEVHFGEKVVCHCDVNHNNWLLSEDNQLYLIDW
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCEEEEEEC
DGAMIADPAMDLGPLLYHYVEKPAWESWLSMYGIELTESLRLRMAWYVLSETITFIAWHK
CCCEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
AKGNDKEFHDAMEELHILMKRIVD
CCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377