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The map label for this gene is ytaF

Identifier: 255767670

GI number: 255767670

Start: 2971531

End: 2972163

Strand: Reverse

Name: ytaF

Synonym: BSU29070

Alternate gene names: 255767670

Gene position: 2972163-2971531 (Counterclockwise)

Preceding gene: 255767671

Following gene: 16079958

Centisome position: 70.5

GC content: 43.13

Gene sequence:

>633_bases
ATGCAAATGGTTTCTATACTGCTGCTGGCGTTGGCTGTCAGCTTGGACAGTTTTTCAGTCGGATTTACGTACGGATTGAG
AAAAATGAAAATACCGTTTAAAGCGATTTTGGTTATCGCCTGCTGTTCCGGTGCTGTCATGTTTATATCCATGCTGATCG
GAAGCTTTCTCACGAAGTTTTTTCCTGTATATGTGACGGAGAAGCTTGGCGGTTTGATATTGGTTGGAATCGGTGCGTGG
GTTCTGTATCAATTTTTCAAACCGGCAAAAGATAAAGAATACCTATTGCATGAAAAAACACTGCTTAATCTAGAGGTTCG
GTCATTAGGAATTGTGATTCATATTTTGAGAAAACCCATGAGTGCGGATATCGACAAATCGGGTGTGATCAACGGAATTG
AGGCGGTCTTATTGGGATTTGCCTTATCGATTGATGCCTTTGGAGCAGGTATAGGCGCAGCCATTCTCGGTTTTTCGCCG
ATTGTGATGAGCATCGCCGTGGCAATCATGAGCTCGCTGTTTGTATCAATTGGAATCAATGCCGGCCATTTTCTGTCTAA
GTGGAAATGGATCGATAAAATGGCGTTTTTGCCGGGGCTTCTATTAATCACGATTGGGCTCTGGAAATTGTAA

Upstream 100 bases:

>100_bases
TCGAAACACGGATTTTTCACTTTCCCATATATATGATTGTGATGAATCCCGGGCATTTCACATCTGATACAAGAGCACCA
ACAGAAAGGAAGAAACGGAT

Downstream 100 bases:

>100_bases
AAAGGAGTGGATCTCTTGACCTTAGTCATTGGTTTAACGGGAGGAATAGCTAGCGGCAAAAGCACGGTAGCCAATATGCT
GATTGAAAAAGGAATAACAG

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MQMVSILLLALAVSLDSFSVGFTYGLRKMKIPFKAILVIACCSGAVMFISMLIGSFLTKFFPVYVTEKLGGLILVGIGAW
VLYQFFKPAKDKEYLLHEKTLLNLEVRSLGIVIHILRKPMSADIDKSGVINGIEAVLLGFALSIDAFGAGIGAAILGFSP
IVMSIAVAIMSSLFVSIGINAGHFLSKWKWIDKMAFLPGLLLITIGLWKL

Sequences:

>Translated_210_residues
MQMVSILLLALAVSLDSFSVGFTYGLRKMKIPFKAILVIACCSGAVMFISMLIGSFLTKFFPVYVTEKLGGLILVGIGAW
VLYQFFKPAKDKEYLLHEKTLLNLEVRSLGIVIHILRKPMSADIDKSGVINGIEAVLLGFALSIDAFGAGIGAAILGFSP
IVMSIAVAIMSSLFVSIGINAGHFLSKWKWIDKMAFLPGLLLITIGLWKL
>Mature_210_residues
MQMVSILLLALAVSLDSFSVGFTYGLRKMKIPFKAILVIACCSGAVMFISMLIGSFLTKFFPVYVTEKLGGLILVGIGAW
VLYQFFKPAKDKEYLLHEKTLLNLEVRSLGIVIHILRKPMSADIDKSGVINGIEAVLLGFALSIDAFGAGIGAAILGFSP
IVMSIAVAIMSSLFVSIGINAGHFLSKWKWIDKMAFLPGLLLITIGLWKL

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTAF_BACSU (C0SP79)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- RefSeq:   NP_390785.2
- EnsemblBacteria:   EBBACT00000002727
- GeneID:   937389
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29070
- GenoList:   BSU29070
- GeneTree:   EBGT00050000001353
- ProtClustDB:   CLSK2395426
- BioCyc:   BSUB:BSU29070-MONOMER
- InterPro:   IPR003810
- InterPro:   IPR014205
- TIGRFAMs:   TIGR02840

Pfam domain/function: PF02659 DUF204

EC number: NA

Molecular weight: Translated: 22773; Mature: 22773

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1141ab9c)-; HASH(0x11a003d4)-; HASH(0x1158acb8)-; HASH(0x11923050)-; HASH(0x10b65f7c)-; HASH(0x10d2d9d0)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMVSILLLALAVSLDSFSVGFTYGLRKMKIPFKAILVIACCSGAVMFISMLIGSFLTKF
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FPVYVTEKLGGLILVGIGAWVLYQFFKPAKDKEYLLHEKTLLNLEVRSLGIVIHILRKPM
HHHHHHHHHCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SADIDKSGVINGIEAVLLGFALSIDAFGAGIGAAILGFSPIVMSIAVAIMSSLFVSIGIN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AGHFLSKWKWIDKMAFLPGLLLITIGLWKL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MQMVSILLLALAVSLDSFSVGFTYGLRKMKIPFKAILVIACCSGAVMFISMLIGSFLTKF
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FPVYVTEKLGGLILVGIGAWVLYQFFKPAKDKEYLLHEKTLLNLEVRSLGIVIHILRKPM
HHHHHHHHHCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SADIDKSGVINGIEAVLLGFALSIDAFGAGIGAAILGFSPIVMSIAVAIMSSLFVSIGIN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AGHFLSKWKWIDKMAFLPGLLLITIGLWKL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377