Click here to switch to the map view.

The map label for this gene is ypzJ

Identifier: 255767503

GI number: 255767503

Start: 2433316

End: 2433522

Strand: Reverse

Name: ypzJ

Synonym: BSU23328

Alternate gene names: 255767503

Gene position: 2433522-2433316 (Counterclockwise)

Preceding gene: 16079391

Following gene: 16079388

Centisome position: 57.73

GC content: 39.13

Gene sequence:

>207_bases
ATGAACAACAAAGGCTGTATAAAATGCGGTAGTACTGAAGCCGGACAAAAAGAAATAGCTACAACCGGCACGGGATTATC
AAAGCTGTTTGACGTGCAGCATAACCGATTTCTAGTGGTTTACTGTAAGAACTGCGGATATTCAGAGTTTTATAATAAAG
AGTCTTCAACTGCCGGGAATATATTGGATTTATTTTTTGGAGGCTGA

Upstream 100 bases:

>100_bases
CAAAATTAAGTAAACTTTAAAGTAGTACGGGTCATTGGGATTGATATTTTGTAGTAAAATAAATCAAACAAACGTGATGT
AATGAAAAGGAGATCGCGAT

Downstream 100 bases:

>100_bases
TCCATGTTTTCGAGCTTGAATGATTTTAAACATATTATGAAAGCAAAAAACGGGGTGCGGTTATCACCTGTGAAATAGGT
TGCCGCAAACATTCCAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MNNKGCIKCGSTEAGQKEIATTGTGLSKLFDVQHNRFLVVYCKNCGYSEFYNKESSTAGNILDLFFGG

Sequences:

>Translated_68_residues
MNNKGCIKCGSTEAGQKEIATTGTGLSKLFDVQHNRFLVVYCKNCGYSEFYNKESSTAGNILDLFFGG
>Mature_68_residues
MNNKGCIKCGSTEAGQKEIATTGTGLSKLFDVQHNRFLVVYCKNCGYSEFYNKESSTAGNILDLFFGG

Specific function: Unknown

COG id: COG3478

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPZJ_BACSU (C0H447)

Other databases:

- EMBL:   AL009126
- RefSeq:   YP_003097757.1
- EnsemblBacteria:   EBBACT00000082724
- GeneID:   8302956
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23328
- GenoList:   BSU23328
- GeneTree:   EBGT00050000006595
- ProtClustDB:   CLSK876500
- BioCyc:   BSUB:BSU23328-MONOMER
- InterPro:   IPR018652

Pfam domain/function: PF09855 DUF2082

EC number: NA

Molecular weight: Translated: 7407; Mature: 7407

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKGCIKCGSTEAGQKEIATTGTGLSKLFDVQHNRFLVVYCKNCGYSEFYNKESSTAGN
CCCCCCEEECCCCCCCCEEECCCCCHHHHHHCCCCCEEEEEECCCCCHHHCCCCCCCCCC
ILDLFFGG
EEEEEECC
>Mature Secondary Structure
MNNKGCIKCGSTEAGQKEIATTGTGLSKLFDVQHNRFLVVYCKNCGYSEFYNKESSTAGN
CCCCCCEEECCCCCCCCEEECCCCCHHHHHHCCCCCEEEEEECCCCCHHHCCCCCCCCCC
ILDLFFGG
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377