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The map label for this gene is ypuB

Identifier: 16079391

GI number: 16079391

Start: 2434143

End: 2434346

Strand: Reverse

Name: ypuB

Synonym: BSU23340

Alternate gene names: 16079391

Gene position: 2434346-2434143 (Counterclockwise)

Preceding gene: 16079393

Following gene: 255767503

Centisome position: 57.75

GC content: 48.04

Gene sequence:

>204_bases
ATGCAAGTTTTGACGGGGTTGCTCGAACAGTACGGATATGCCGTCTTGTTTATTGTCTTGATGTTAGAGCTTCTAGCTTT
ACTTGGACCGGGAGAGTTTGCCGGTGTTCTCGTGTTTCAAGAAAAGTTAAACTGGGTGCTAAGCATGTTAGCGGCCGGAT
TGGGGAGCTGTGGGAGTGAGCATGTCGTATTGGATCGGGTATAG

Upstream 100 bases:

>100_bases
CATAGACAATGTTGTTGGACGACTGAAGATAAAATTGTGCTGATTATACAAAAAGTGGATTGGGAATGATAAAAGAACAA
AAAAGTTTAAGGAGAATCAC

Downstream 100 bases:

>100_bases
ACTGGGCCCAGCTGCAATTCAGAAAGCTTTTGCGTCGAGAGGTGTTCTGTTAGCCGTTATTGTTCTAACTTTTTTTTGGA
CGGTATTCAGAGGGCAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFX1

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MQVLTGLLEQYGYAVLFIVLMLELLALLGPGEFAGVLVFQEKLNWVLSMLAAGLGSCGSEHVVLDRV

Sequences:

>Translated_67_residues
MQVLTGLLEQYGYAVLFIVLMLELLALLGPGEFAGVLVFQEKLNWVLSMLAAGLGSCGSEHVVLDRV
>Mature_67_residues
MQVLTGLLEQYGYAVLFIVLMLELLALLGPGEFAGVLVFQEKLNWVLSMLAAGLGSCGSEHVVLDRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPUB_BACSU (P35151)

Other databases:

- EMBL:   L09228
- EMBL:   AL009126
- PIR:   S45538
- RefSeq:   NP_390215.1
- EnsemblBacteria:   EBBACT00000000890
- GeneID:   938942
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23340
- NMPDR:   fig|224308.1.peg.2339
- GenoList:   BSU23340
- BioCyc:   BSUB:BSU23340-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7237; Mature: 7237

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLTGLLEQYGYAVLFIVLMLELLALLGPGEFAGVLVFQEKLNWVLSMLAAGLGSCGSE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HVVLDRV
CEEECCC
>Mature Secondary Structure
MQVLTGLLEQYGYAVLFIVLMLELLALLGPGEFAGVLVFQEKLNWVLSMLAAGLGSCGSE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
HVVLDRV
CEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377