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The map label for this gene is ymfF

Identifier: 255767383

GI number: 255767383

Start: 1757037

End: 1758317

Strand: Direct

Name: ymfF

Synonym: BSU16845

Alternate gene names: 255767383

Gene position: 1757037-1758317 (Clockwise)

Preceding gene: 255767382

Following gene: 255767384

Centisome position: 41.68

GC content: 42.23

Gene sequence:

>1281_bases
ATGTCATATGTTAATGAACTCAAATCAAAGCACGGCGGTTTAACCGCACACATTGTAAAAACAGAAAAATTCAAAACCGT
CTCGCTTATTTTTAAGATGCTTGCGCCGCTGACAAAGGATCAAGTCACCAAAAGAGCGCTTCTCCCGCATGTGCTTCTTC
GCGGAACGAAAAGCCATCCGAAAACCGCAGGATTGCGTTCATACTTGGATGAGCTGTACGGCACGTCAGTATCGGCTGAT
CTTACGAAAAAAGGAGAGCGGCATGTCATTACGTTCAGGCTTGAAATCCCGAATGAAAAATATTTAAAAGACCAAACGCC
GCTTCTCGAGAAAGGGCTCCAGCTTCTCGCAGAACTCGTCTTTTCACCTGCTTTGGAGGGAGACGCTTTTCAGTCACAAT
ATGTGGCTCAAGAAAAACGGACGCTTAAGCAAAGAATCCAAGCCGTCTATGATGATAAAATGCGTTATTCGAATTTAAGG
CTGATACAGGAAATGTGCAAAAATGATCCTTACGCGCTTCATGTCAATGGTGAAATCGACGATGTCGATGACATTACGGC
AGAGCAATTATACGAAACATACCAAAGCGCTATCCAAAAAGACCAGCTTGATCTATATGTTGTTGGCGACGTGGACAGTA
ACCAGGTACAATCGGCAATTGATAAGTATTTCAAAACAGAAGAGCGCACTCTTGGCATGATTGAAAACAATCACGCTGAT
GAAAAAGTTCAGCCAAAAGAAGTAATTGATGAAGAGGATGTCAAGCAAGGAAAACTGAATATCGGCTACCGCACCAGCAT
CACTTATACAGATCAGGATTATCCTGCTTTACAAGTGTTTAACGGATTGTTCGGCGGATTCTCTCATTCTAAACTTTTCA
TTAATGTTCGGGAAAAAGCCAGTCTTGCTTACTACGCGGCTTCGCGTATAGAAAGTTTTAAAGGCTTGTTAATGGTGATG
TCAGGCATTGAAGTGAAAAATTTTGAACAGGCGGTTTCGATTATTGCTGAGCAATTCCAGGCAATGAAAAATGGCGATTT
CAGTGAGCAGGATATAGCACAGACAAAGGCCGTTATTCGAAATCAAGTGCTGGAAACGATTGATACAGCATACGGTTTAT
CTGAGTTTTTATATCAGCAGGCCGCTGCTCAAGTCGAGATTCCTATCGAAGACTTTCTTGCCAATATTGAGAATGTCACA
AAAGAGGATATCATTAAAGCCGGCGAAAAGATTCAGCTTGATACGACTTATTTCTTAAAAGGGACGGAGGGTGCATCTTG
A

Upstream 100 bases:

>100_bases
AATCCTACAGTTGCTATAATTACATGAAAGAGTGTTTCTGCGGATGCTGAAAATTGGTCATAATACATACTAATTAAGAA
ATGAACGAAGGAGGTTCCAT

Downstream 100 bases:

>100_bases
TCAAACCAATCGAATATGAACAGCTTCAGGAGACGCTGTATCATGAAAAAATGTCCAACGGCCTTGATGTTTACGTTTTG
CCGAAAAAAGGCTTCAACAA

Product: metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MSYVNELKSKHGGLTAHIVKTEKFKTVSLIFKMLAPLTKDQVTKRALLPHVLLRGTKSHPKTAGLRSYLDELYGTSVSAD
LTKKGERHVITFRLEIPNEKYLKDQTPLLEKGLQLLAELVFSPALEGDAFQSQYVAQEKRTLKQRIQAVYDDKMRYSNLR
LIQEMCKNDPYALHVNGEIDDVDDITAEQLYETYQSAIQKDQLDLYVVGDVDSNQVQSAIDKYFKTEERTLGMIENNHAD
EKVQPKEVIDEEDVKQGKLNIGYRTSITYTDQDYPALQVFNGLFGGFSHSKLFINVREKASLAYYAASRIESFKGLLMVM
SGIEVKNFEQAVSIIAEQFQAMKNGDFSEQDIAQTKAVIRNQVLETIDTAYGLSEFLYQQAAAQVEIPIEDFLANIENVT
KEDIIKAGEKIQLDTTYFLKGTEGAS

Sequences:

>Translated_426_residues
MSYVNELKSKHGGLTAHIVKTEKFKTVSLIFKMLAPLTKDQVTKRALLPHVLLRGTKSHPKTAGLRSYLDELYGTSVSAD
LTKKGERHVITFRLEIPNEKYLKDQTPLLEKGLQLLAELVFSPALEGDAFQSQYVAQEKRTLKQRIQAVYDDKMRYSNLR
LIQEMCKNDPYALHVNGEIDDVDDITAEQLYETYQSAIQKDQLDLYVVGDVDSNQVQSAIDKYFKTEERTLGMIENNHAD
EKVQPKEVIDEEDVKQGKLNIGYRTSITYTDQDYPALQVFNGLFGGFSHSKLFINVREKASLAYYAASRIESFKGLLMVM
SGIEVKNFEQAVSIIAEQFQAMKNGDFSEQDIAQTKAVIRNQVLETIDTAYGLSEFLYQQAAAQVEIPIEDFLANIENVT
KEDIIKAGEKIQLDTTYFLKGTEGAS
>Mature_425_residues
SYVNELKSKHGGLTAHIVKTEKFKTVSLIFKMLAPLTKDQVTKRALLPHVLLRGTKSHPKTAGLRSYLDELYGTSVSADL
TKKGERHVITFRLEIPNEKYLKDQTPLLEKGLQLLAELVFSPALEGDAFQSQYVAQEKRTLKQRIQAVYDDKMRYSNLRL
IQEMCKNDPYALHVNGEIDDVDDITAEQLYETYQSAIQKDQLDLYVVGDVDSNQVQSAIDKYFKTEERTLGMIENNHADE
KVQPKEVIDEEDVKQGKLNIGYRTSITYTDQDYPALQVFNGLFGGFSHSKLFINVREKASLAYYAASRIESFKGLLMVMS
GIEVKNFEQAVSIIAEQFQAMKNGDFSEQDIAQTKAVIRNQVLETIDTAYGLSEFLYQQAAAQVEIPIEDFLANIENVTK
EDIIKAGEKIQLDTTYFLKGTEGAS

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YMFF_BACSU (O31764)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389566.2
- ProteinModelPortal:   O31764
- SMR:   O31764
- EnsemblBacteria:   EBBACT00000003529
- GeneID:   940141
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU16845
- GenoList:   BSU16840
- GeneTree:   EBGT00050000001968
- ProtClustDB:   CLSK2503216
- BioCyc:   BSUB:BSU16845-MONOMER
- GO:   GO:0006508
- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863
- Gene3D:   G3DSA:3.30.830.10

Pfam domain/function: PF05193 Peptidase_M16_C; SSF63411 Metalloenz_metal-bd

EC number: NA

Molecular weight: Translated: 48204; Mature: 48073

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVNELKSKHGGLTAHIVKTEKFKTVSLIFKMLAPLTKDQVTKRALLPHVLLRGTKSHP
CCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
KTAGLRSYLDELYGTSVSADLTKKGERHVITFRLEIPNEKYLKDQTPLLEKGLQLLAELV
CHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEEECCCHHHHCCCCHHHHHHHHHHHHHH
FSPALEGDAFQSQYVAQEKRTLKQRIQAVYDDKMRYSNLRLIQEMCKNDPYALHVNGEID
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
DVDDITAEQLYETYQSAIQKDQLDLYVVGDVDSNQVQSAIDKYFKTEERTLGMIENNHAD
CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EKVQPKEVIDEEDVKQGKLNIGYRTSITYTDQDYPALQVFNGLFGGFSHSKLFINVREKA
CCCCHHHHCCHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEHHHH
SLAYYAASRIESFKGLLMVMSGIEVKNFEQAVSIIAEQFQAMKNGDFSEQDIAQTKAVIR
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
NQVLETIDTAYGLSEFLYQQAAAQVEIPIEDFLANIENVTKEDIIKAGEKIQLDTTYFLK
HHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHCCHHHHHCCCCEEEEEEEEEEE
GTEGAS
CCCCCC
>Mature Secondary Structure 
SYVNELKSKHGGLTAHIVKTEKFKTVSLIFKMLAPLTKDQVTKRALLPHVLLRGTKSHP
CHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
KTAGLRSYLDELYGTSVSADLTKKGERHVITFRLEIPNEKYLKDQTPLLEKGLQLLAELV
CHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEEECCCHHHHCCCCHHHHHHHHHHHHHH
FSPALEGDAFQSQYVAQEKRTLKQRIQAVYDDKMRYSNLRLIQEMCKNDPYALHVNGEID
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
DVDDITAEQLYETYQSAIQKDQLDLYVVGDVDSNQVQSAIDKYFKTEERTLGMIENNHAD
CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EKVQPKEVIDEEDVKQGKLNIGYRTSITYTDQDYPALQVFNGLFGGFSHSKLFINVREKA
CCCCHHHHCCHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEHHHH
SLAYYAASRIESFKGLLMVMSGIEVKNFEQAVSIIAEQFQAMKNGDFSEQDIAQTKAVIR
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
NQVLETIDTAYGLSEFLYQQAAAQVEIPIEDFLANIENVTKEDIIKAGEKIQLDTTYFLK
HHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHCCHHHHHCCCCEEEEEEEEEEE
GTEGAS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377