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The map label for this gene is ycnJ

Identifier: 255767121

GI number: 255767121

Start: 446801

End: 448426

Strand: Reverse

Name: ycnJ

Synonym: BSU03950

Alternate gene names: 255767121

Gene position: 448426-446801 (Counterclockwise)

Preceding gene: 16077464

Following gene: 16077462

Centisome position: 10.64

GC content: 48.65

Gene sequence:

>1626_bases
ATGAAGCGAAACAGATGGTGGATCATCCTTCTGCTTTTTCTTGTTTTCCTGCCGAAAACAAGCTTTGCTCACGCCTATAT
TGTCAAATCTTCACCTGGGGAAAACAGCGAATTAAAAAGCGCCCCTGCGCAGGTGGAAATCGAATTTAATGAACCGGTTG
AAGAAGGGTTTCATTACATTAAAGTCTATAATTCAAACGGCGACCGTGTGGATACGGACAAGACTGAAATCAAAAAAGAT
AATCATCACATCATGACAGTGAAGCTGAAGAAGAATCTGCCTAAAGATGTGTACAGAGCGGAATGGAATGCCGTATCCGC
GGATGGACATCCTGTTTCCGGCGTCATTCCGTTCAGTATCGGGAAAGCGGATGGCGGATTCAGCAGCCAAAAAGCAGCCG
ATTCAGCGCTGAATCCGGGAACAGCAGCAGATCGCGCGATTCTGTATACAGCCTTATCTCTGTTTATCGGAACGGTTTTC
TTCCATCTTTTCTGGTATAAAGGGAAATCAGAACAGCTCGTCAAACGGACGAGACGTATCCTGACCGGCTCGATCGCAGC
ATTGGGGCTGGCGCTTTTGCTTCAGCTTCCGATTCAGACAAAAGCGAACGCAGGCGGCGGCTGGGGCAGCGCATTCCAGC
CGGGCTACATCAGAGAAACACTGTTTGAGACAGCAGGCGGCTCCATTTGGATCATACAGGCTGCGCTGTTCGTGCTGCTC
GCACTGTCTGTCATCCCTGCGATACGGAAAAACCGCTTTTCATCCTTTGGCTATTGGACAGCGCCGCTCATTTTCTTTTT
CGGTCTCCTGCTTGCCAAGGCGTTTACCGGGCATGCTGCTGTCGTTGAAGAAAAAACGGTCGGCATTTTGATGGATTTCC
TTCATTTAACTTCCGCTTCCATCTGGGTCGGCGGAATAGCGGCACTCGTTTTGCTGCTCTCAAAAGAATGGAGGCAGCCT
GACAAAACGCTCGCGTGGGAGACGGTCAGACGGTTCTCCCCATGGGCGCTCACTGCAGTCGGCGTCATTTTGTTTTCAGG
CTTGCTCAATGGATTTTTCATCATTCGTTCAATGGATTCACTGTTCCATACAGCGTACGGACAAGCTCTTTTAGTGAAAA
GCGGGCTGTTTGTTTTCATGCTGGTCTTAGGCGCAATTCATTTTCTGCTTACCAGAAAGCAGCGCCGCACAGGAATCAGC
CGAACGTTGAAAGCGGAGTGGGCAATCGGCATCGCTGTATTGATCACAGCGGCCGTGTTTACAAGCCTGCCAAGCCCGCC
TGAGCCAGCGCCGGAACCGTTCTACCAAACCAAAGCGATAGAGAACGGACAAAGCGTTTCTCTCAGCATCAGCCCAAACC
AGCCTGGAAAAAATGTTTTTGAGCTGCGGGTCACCGACCATAACGGTGATCCCGTGAAAAACATCCAGCAAATCACGTTA
ACCGTTTATAAAACAGGCCTGTCAGGCAGCGAAAACAAAAGCACCTTTACATTAAAAGAAAAAACAAAAGGCGTCTTCCA
AGATCAAAACCTGTCGATTAATGAAAAAGGAAACTGGAAGATCAAAGTCCACGGCCTGACCGGCGACTTTAACGAAATCA
ATATCATGTTTACAAAGACCAATTAA

Upstream 100 bases:

>100_bases
TTCGACCAAGCGCTGGAAGACATGCTTCAAGACCGAAAGAAACGCTGCACCTGCACCAAGAAATAACACAACACATACAG
CGGAAGGTGGTGTCTGAGTG

Downstream 100 bases:

>100_bases
GGAGTGTTTACGTTGTTGAAAAAAATCGCATTGACACTATGTCCGGCTATTGTCGGCTCCCTCTTATTCTTTACGGCCCC
TGCCAGCGCGCATGTTTCTG

Product: copper import protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MKRNRWWIILLLFLVFLPKTSFAHAYIVKSSPGENSELKSAPAQVEIEFNEPVEEGFHYIKVYNSNGDRVDTDKTEIKKD
NHHIMTVKLKKNLPKDVYRAEWNAVSADGHPVSGVIPFSIGKADGGFSSQKAADSALNPGTAADRAILYTALSLFIGTVF
FHLFWYKGKSEQLVKRTRRILTGSIAALGLALLLQLPIQTKANAGGGWGSAFQPGYIRETLFETAGGSIWIIQAALFVLL
ALSVIPAIRKNRFSSFGYWTAPLIFFFGLLLAKAFTGHAAVVEEKTVGILMDFLHLTSASIWVGGIAALVLLLSKEWRQP
DKTLAWETVRRFSPWALTAVGVILFSGLLNGFFIIRSMDSLFHTAYGQALLVKSGLFVFMLVLGAIHFLLTRKQRRTGIS
RTLKAEWAIGIAVLITAAVFTSLPSPPEPAPEPFYQTKAIENGQSVSLSISPNQPGKNVFELRVTDHNGDPVKNIQQITL
TVYKTGLSGSENKSTFTLKEKTKGVFQDQNLSINEKGNWKIKVHGLTGDFNEINIMFTKTN

Sequences:

>Translated_541_residues
MKRNRWWIILLLFLVFLPKTSFAHAYIVKSSPGENSELKSAPAQVEIEFNEPVEEGFHYIKVYNSNGDRVDTDKTEIKKD
NHHIMTVKLKKNLPKDVYRAEWNAVSADGHPVSGVIPFSIGKADGGFSSQKAADSALNPGTAADRAILYTALSLFIGTVF
FHLFWYKGKSEQLVKRTRRILTGSIAALGLALLLQLPIQTKANAGGGWGSAFQPGYIRETLFETAGGSIWIIQAALFVLL
ALSVIPAIRKNRFSSFGYWTAPLIFFFGLLLAKAFTGHAAVVEEKTVGILMDFLHLTSASIWVGGIAALVLLLSKEWRQP
DKTLAWETVRRFSPWALTAVGVILFSGLLNGFFIIRSMDSLFHTAYGQALLVKSGLFVFMLVLGAIHFLLTRKQRRTGIS
RTLKAEWAIGIAVLITAAVFTSLPSPPEPAPEPFYQTKAIENGQSVSLSISPNQPGKNVFELRVTDHNGDPVKNIQQITL
TVYKTGLSGSENKSTFTLKEKTKGVFQDQNLSINEKGNWKIKVHGLTGDFNEINIMFTKTN
>Mature_541_residues
MKRNRWWIILLLFLVFLPKTSFAHAYIVKSSPGENSELKSAPAQVEIEFNEPVEEGFHYIKVYNSNGDRVDTDKTEIKKD
NHHIMTVKLKKNLPKDVYRAEWNAVSADGHPVSGVIPFSIGKADGGFSSQKAADSALNPGTAADRAILYTALSLFIGTVF
FHLFWYKGKSEQLVKRTRRILTGSIAALGLALLLQLPIQTKANAGGGWGSAFQPGYIRETLFETAGGSIWIIQAALFVLL
ALSVIPAIRKNRFSSFGYWTAPLIFFFGLLLAKAFTGHAAVVEEKTVGILMDFLHLTSASIWVGGIAALVLLLSKEWRQP
DKTLAWETVRRFSPWALTAVGVILFSGLLNGFFIIRSMDSLFHTAYGQALLVKSGLFVFMLVLGAIHFLLTRKQRRTGIS
RTLKAEWAIGIAVLITAAVFTSLPSPPEPAPEPFYQTKAIENGQSVSLSISPNQPGKNVFELRVTDHNGDPVKNIQQITL
TVYKTGLSGSENKSTFTLKEKTKGVFQDQNLSINEKGNWKIKVHGLTGDFNEINIMFTKTN

Specific function: Involved in uptake of extracellular oxidized copper under copper-limiting conditions

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the CopD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCNJ_BACSU (C0SP95)

Other databases:

- EMBL:   D50453
- EMBL:   AL009126
- PIR:   F69764
- RefSeq:   NP_388277.2
- ProteinModelPortal:   C0SP95
- SMR:   C0SP95
- EnsemblBacteria:   EBBACT00000003948
- GeneID:   938258
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU03950
- GenoList:   BSU03950
- GeneTree:   EBGT00050000002059
- HOGENOM:   HBG338537
- ProtClustDB:   CLSK886709
- BioCyc:   BSUB:BSU03950-MONOMER
- InterPro:   IPR007348
- InterPro:   IPR008457
- InterPro:   IPR014755
- InterPro:   IPR014756
- Gene3D:   G3DSA:2.60.40.1220

Pfam domain/function: PF04234 CopC; PF05425 CopD; SSF81296 Ig_E-set

EC number: NA

Molecular weight: Translated: 59795; Mature: 59795

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc53c514)-; HASH(0xcb197e4)-; HASH(0xcf1993c)-; HASH(0xbf557b0)-; HASH(0xc8aa1b0)-; HASH(0xb4a7b1c)-; HASH(0xc9bdd64)-; HASH(0x40a930fc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNRWWIILLLFLVFLPKTSFAHAYIVKSSPGENSELKSAPAQVEIEFNEPVEEGFHYI
CCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHCCCCCEEEEEECCCHHCCCEEE
KVYNSNGDRVDTDKTEIKKDNHHIMTVKLKKNLPKDVYRAEWNAVSADGHPVSGVIPFSI
EEECCCCCCCCCCHHHHCCCCCEEEEEEECCCCCHHHHHCCCCEECCCCCCCCCEEEEEE
GKADGGFSSQKAADSALNPGTAADRAILYTALSLFIGTVFFHLFWYKGKSEQLVKRTRRI
CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LTGSIAALGLALLLQLPIQTKANAGGGWGSAFQPGYIRETLFETAGGSIWIIQAALFVLL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHH
ALSVIPAIRKNRFSSFGYWTAPLIFFFGLLLAKAFTGHAAVVEEKTVGILMDFLHLTSAS
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHH
IWVGGIAALVLLLSKEWRQPDKTLAWETVRRFSPWALTAVGVILFSGLLNGFFIIRSMDS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LFHTAYGQALLVKSGLFVFMLVLGAIHFLLTRKQRRTGISRTLKAEWAIGIAVLITAAVF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TSLPSPPEPAPEPFYQTKAIENGQSVSLSISPNQPGKNVFELRVTDHNGDPVKNIQQITL
HCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHEEE
TVYKTGLSGSENKSTFTLKEKTKGVFQDQNLSINEKGNWKIKVHGLTGDFNEINIMFTKT
EEEEECCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEC
N
H
>Mature Secondary Structure
MKRNRWWIILLLFLVFLPKTSFAHAYIVKSSPGENSELKSAPAQVEIEFNEPVEEGFHYI
CCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHCCCCCEEEEEECCCHHCCCEEE
KVYNSNGDRVDTDKTEIKKDNHHIMTVKLKKNLPKDVYRAEWNAVSADGHPVSGVIPFSI
EEECCCCCCCCCCHHHHCCCCCEEEEEEECCCCCHHHHHCCCCEECCCCCCCCCEEEEEE
GKADGGFSSQKAADSALNPGTAADRAILYTALSLFIGTVFFHLFWYKGKSEQLVKRTRRI
CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LTGSIAALGLALLLQLPIQTKANAGGGWGSAFQPGYIRETLFETAGGSIWIIQAALFVLL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHH
ALSVIPAIRKNRFSSFGYWTAPLIFFFGLLLAKAFTGHAAVVEEKTVGILMDFLHLTSAS
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHH
IWVGGIAALVLLLSKEWRQPDKTLAWETVRRFSPWALTAVGVILFSGLLNGFFIIRSMDS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LFHTAYGQALLVKSGLFVFMLVLGAIHFLLTRKQRRTGISRTLKAEWAIGIAVLITAAVF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TSLPSPPEPAPEPFYQTKAIENGQSVSLSISPNQPGKNVFELRVTDHNGDPVKNIQQITL
HCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHEEE
TVYKTGLSGSENKSTFTLKEKTKGVFQDQNLSINEKGNWKIKVHGLTGDFNEINIMFTKT
EEEEECCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEC
N
H

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377