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The map label for this gene is ycnI

Identifier: 16077462

GI number: 16077462

Start: 446174

End: 446788

Strand: Reverse

Name: ycnI

Synonym: BSU03940

Alternate gene names: 16077462

Gene position: 446788-446174 (Counterclockwise)

Preceding gene: 255767121

Following gene: 16077457

Centisome position: 10.6

GC content: 47.8

Gene sequence:

>615_bases
TTGTTGAAAAAAATCGCATTGACACTATGTCCGGCTATTGTCGGCTCCCTCTTATTCTTTACGGCCCCTGCCAGCGCGCA
TGTTTCTGTAAAACCGGCTGAGTCTGCTGCAGGCTCTTGGGAAACGTATACAATGAAGGTTCCTTCTGAGAAAAATCTGC
CGACAACGAAGGTTGTCCTCAAAATGCCGAAGGATGTTGAATTCCAGCAATATGAGCCAATTCCGGGCTGGAAGGTTTCC
ACTCAAAAACATGATGACAAATCAGTATCCGTGACATGGGAGGCGACTGACGGAGGCATTCAGGAAGGCCAGTTCCAGCA
GTTTACCTTTGTTGCCAAAAACCCTGACAAAGCGGAGGAAGCTGCTTGGGACGCATACCAATATTACAAAGACGGCAGCA
TTGTTGAGTGGACAGGTGACGAGGATGCCGATACACCTCATTCCATTACAAACATCACGTCTGCAAAGCAAGTGACAGAT
GAGCACGGCGCCACGAAAACAGAAGACGATTCCGAAAACTCAGGTTCTTCAGCTCTAGACATTACAGCGATGGTGCTGTC
TGCGGCTGCCATTATTTTATCTGTAGCAGCACTTGTAAAGAAAAAGCGTGCCTAA

Upstream 100 bases:

>100_bases
TAATGAAAAAGGAAACTGGAAGATCAAAGTCCACGGCCTGACCGGCGACTTTAACGAAATCAATATCATGTTTACAAAGA
CCAATTAAGGAGTGTTTACG

Downstream 100 bases:

>100_bases
TAAAGAAAGCGATCCAGATGTCATGTCTGGGTCGCTTTTTATGTTTAACCGCGGCCTGCCTGGAATGAAGGATATTGTGT
CATACCGCCGTCCGCGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLKKIALTLCPAIVGSLLFFTAPASAHVSVKPAESAAGSWETYTMKVPSEKNLPTTKVVLKMPKDVEFQQYEPIPGWKVS
TQKHDDKSVSVTWEATDGGIQEGQFQQFTFVAKNPDKAEEAAWDAYQYYKDGSIVEWTGDEDADTPHSITNITSAKQVTD
EHGATKTEDDSENSGSSALDITAMVLSAAAIILSVAALVKKKRA

Sequences:

>Translated_204_residues
MLKKIALTLCPAIVGSLLFFTAPASAHVSVKPAESAAGSWETYTMKVPSEKNLPTTKVVLKMPKDVEFQQYEPIPGWKVS
TQKHDDKSVSVTWEATDGGIQEGQFQQFTFVAKNPDKAEEAAWDAYQYYKDGSIVEWTGDEDADTPHSITNITSAKQVTD
EHGATKTEDDSENSGSSALDITAMVLSAAAIILSVAALVKKKRA
>Mature_204_residues
MLKKIALTLCPAIVGSLLFFTAPASAHVSVKPAESAAGSWETYTMKVPSEKNLPTTKVVLKMPKDVEFQQYEPIPGWKVS
TQKHDDKSVSVTWEATDGGIQEGQFQQFTFVAKNPDKAEEAAWDAYQYYKDGSIVEWTGDEDADTPHSITNITSAKQVTD
EHGATKTEDDSENSGSSALDITAMVLSAAAIILSVAALVKKKRA

Specific function: Unknown

COG id: COG4549

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass type I membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCNI_BACSU (P94431)

Other databases:

- EMBL:   D50453
- EMBL:   AL009126
- PIR:   E69764
- RefSeq:   NP_388276.1
- ProteinModelPortal:   P94431
- SMR:   P94431
- EnsemblBacteria:   EBBACT00000000803
- GeneID:   938266
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU03940
- NMPDR:   fig|224308.1.peg.395
- GenoList:   BSU03940
- GeneTree:   EBGT00050000002972
- HOGENOM:   HBG670862
- OMA:   FTFVAKN
- ProtClustDB:   CLSK886708
- BioCyc:   BSUB:BSU03940-MONOMER
- InterPro:   IPR012533

Pfam domain/function: PF07987 DUF1775

EC number: NA

Molecular weight: Translated: 22113; Mature: 22113

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc007434)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKIALTLCPAIVGSLLFFTAPASAHVSVKPAESAAGSWETYTMKVPSEKNLPTTKVVL
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEE
KMPKDVEFQQYEPIPGWKVSTQKHDDKSVSVTWEATDGGIQEGQFQQFTFVAKNPDKAEE
ECCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHH
AAWDAYQYYKDGSIVEWTGDEDADTPHSITNITSAKQVTDEHGATKTEDDSENSGSSALD
HHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
ITAMVLSAAAIILSVAALVKKKRA
HHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MLKKIALTLCPAIVGSLLFFTAPASAHVSVKPAESAAGSWETYTMKVPSEKNLPTTKVVL
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEE
KMPKDVEFQQYEPIPGWKVSTQKHDDKSVSVTWEATDGGIQEGQFQQFTFVAKNPDKAEE
ECCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHH
AAWDAYQYYKDGSIVEWTGDEDADTPHSITNITSAKQVTDEHGATKTEDDSENSGSSALD
HHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
ITAMVLSAAAIILSVAALVKKKRA
HHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377