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The map label for this gene is yfbE [C]

Identifier: 239618127

GI number: 239618127

Start: 1891620

End: 1892783

Strand: Direct

Name: yfbE [C]

Synonym: Kole_1760

Alternate gene names: 239618127

Gene position: 1891620-1892783 (Clockwise)

Preceding gene: 239618126

Following gene: 239618128

Centisome position: 82.17

GC content: 41.58

Gene sequence:

>1164_bases
ATGTTTGTTCCCCTTGCCAGACCCGATATAACCCAGAAAGAAATTGATGCTGTAACAGAGGTAATGAAATCTGGGATTTT
ATCAATAGGAAAAAAGGTAGTTGAGTTTGAAAAACTCGTCGCGAATTACAGCGAAAGGACCTATGGGATAGCTGTAAACA
GCGGAACAAGTGCACTCCATCTAGCTTTGAAAGCTCTTGGTGTCAAACCTGGAGATTTCGTTATAACCAGTCCTTTCACT
TTTATTTCGTCCGCAAATGTAGCGCTTTTTGAAGGAGCAATCCCTGTTTTTGCCGATATCGACGAAAAAACTTTCAATGT
AACGCCAAAAACCTTTAAAGAAGCCATTGAAAGGTACCACAGGAAGGGGTTCAAAACTTCCAAAGTCAAATACTCACCTT
TCAAACCAAGGTTTTTCGTTGCTGTTGATATTTTTGGTCATCCTCTCGACTGGGATGGAATAAATGAGGTTGCTGCTAAA
TGGGGTATACAGATAGTTGAGGATTCATGTGAAGCCCTTGGAAGTGAATACAAAGGGAAAAGGATAGGTAGCTTCGGGGC
AGCCGGGACTTTTGCTTTCTATCCCAACAAACAGATAACCACCGGTGAAGGCGGGATAGTTGTAACGGACGATCCCGAAA
TAGCAAAACTCGTGAAAAGCATGAGAAATCAGGGCAGGGGAGAGAACGAAAACTGGCTTGAACACGTTAGAATTGGTTAT
AATTACCGGCTTGACGAAGTTTCCGCTGCGATAGGTGTGGAGCAAATGAAGCGTATAGAGGAAATTCTGGAAAAAAGAGA
ATTGGTAGCAAAAAGGTACAATGAGCTACTGAAGAATGTTGACGGAATCGAAACTCCCTTTGTGGATAGTTACGTCAGCA
GGAAGAGCTGGTTTGTTTACGTTGTTAAACTTGCTCCCGAAATCGATAGAAATAAGGTAAGGGAATACCTTCAGAAAAAC
GGCGTGCAATGTCGTGAATATTTCAAGCCCGTACATTTGCAACCCTTCTATAGAGAGCAGTTTGGATATGAACCCGGTAC
CTTTGAAATTACTGAAAAAGTATCCAAAAGAACTCTTGCGATTCCTTTTTTCAACGCTTTAACCCTTGAAGAACAAGAAT
ACGTTGTCGAAACGCTAAAAAAAGCAATAGAATTTGCAGGGTGA

Upstream 100 bases:

>100_bases
GATAGCCAGGGTGAAAGTTGAAATACCGGAACTCGGTTTGAGAAAAGAGAAAAAGTAGTGAGTAGGTTCTGTAAAAAGTT
TTTTGAAAGGAGCAGATTAT

Downstream 100 bases:

>100_bases
AGGCCATGGAATTTTTATTAGCTTGTTCACTGTCCATCTTCATGACTTTTGTCTTCAGGCATATTGGAATAAAATTTGGA
TTTTTAGATAAACCTGCCGG

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MFVPLARPDITQKEIDAVTEVMKSGILSIGKKVVEFEKLVANYSERTYGIAVNSGTSALHLALKALGVKPGDFVITSPFT
FISSANVALFEGAIPVFADIDEKTFNVTPKTFKEAIERYHRKGFKTSKVKYSPFKPRFFVAVDIFGHPLDWDGINEVAAK
WGIQIVEDSCEALGSEYKGKRIGSFGAAGTFAFYPNKQITTGEGGIVVTDDPEIAKLVKSMRNQGRGENENWLEHVRIGY
NYRLDEVSAAIGVEQMKRIEEILEKRELVAKRYNELLKNVDGIETPFVDSYVSRKSWFVYVVKLAPEIDRNKVREYLQKN
GVQCREYFKPVHLQPFYREQFGYEPGTFEITEKVSKRTLAIPFFNALTLEEQEYVVETLKKAIEFAG

Sequences:

>Translated_387_residues
MFVPLARPDITQKEIDAVTEVMKSGILSIGKKVVEFEKLVANYSERTYGIAVNSGTSALHLALKALGVKPGDFVITSPFT
FISSANVALFEGAIPVFADIDEKTFNVTPKTFKEAIERYHRKGFKTSKVKYSPFKPRFFVAVDIFGHPLDWDGINEVAAK
WGIQIVEDSCEALGSEYKGKRIGSFGAAGTFAFYPNKQITTGEGGIVVTDDPEIAKLVKSMRNQGRGENENWLEHVRIGY
NYRLDEVSAAIGVEQMKRIEEILEKRELVAKRYNELLKNVDGIETPFVDSYVSRKSWFVYVVKLAPEIDRNKVREYLQKN
GVQCREYFKPVHLQPFYREQFGYEPGTFEITEKVSKRTLAIPFFNALTLEEQEYVVETLKKAIEFAG
>Mature_387_residues
MFVPLARPDITQKEIDAVTEVMKSGILSIGKKVVEFEKLVANYSERTYGIAVNSGTSALHLALKALGVKPGDFVITSPFT
FISSANVALFEGAIPVFADIDEKTFNVTPKTFKEAIERYHRKGFKTSKVKYSPFKPRFFVAVDIFGHPLDWDGINEVAAK
WGIQIVEDSCEALGSEYKGKRIGSFGAAGTFAFYPNKQITTGEGGIVVTDDPEIAKLVKSMRNQGRGENENWLEHVRIGY
NYRLDEVSAAIGVEQMKRIEEILEKRELVAKRYNELLKNVDGIETPFVDSYVSRKSWFVYVVKLAPEIDRNKVREYLQKN
GVQCREYFKPVHLQPFYREQFGYEPGTFEITEKVSKRTLAIPFFNALTLEEQEYVVETLKKAIEFAG

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=396, Percent_Identity=29.2929292929293, Blast_Score=191, Evalue=7e-50,
Organism=Escherichia coli, GI2367285, Length=392, Percent_Identity=26.7857142857143, Blast_Score=127, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43824; Mature: 43824

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVPLARPDITQKEIDAVTEVMKSGILSIGKKVVEFEKLVANYSERTYGIAVNSGTSALH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH
LALKALGVKPGDFVITSPFTFISSANVALFEGAIPVFADIDEKTFNVTPKTFKEAIERYH
HHHHHHCCCCCCEEEECCHHHHCCCCEEEEECCCCEEECCCCCEECCCHHHHHHHHHHHH
RKGFKTSKVKYSPFKPRFFVAVDIFGHPLDWDGINEVAAKWGIQIVEDSCEALGSEYKGK
HCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHCHHCCCC
RIGSFGAAGTFAFYPNKQITTGEGGIVVTDDPEIAKLVKSMRNQGRGENENWLEHVRIGY
CCCCCCCCCEEEECCCCEEECCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
NYRLDEVSAAIGVEQMKRIEEILEKRELVAKRYNELLKNVDGIETPFVDSYVSRKSWFVY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEE
VVKLAPEIDRNKVREYLQKNGVQCREYFKPVHLQPFYREQFGYEPGTFEITEKVSKRTLA
EEEECCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCEEE
IPFFNALTLEEQEYVVETLKKAIEFAG
EECHHHEECCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFVPLARPDITQKEIDAVTEVMKSGILSIGKKVVEFEKLVANYSERTYGIAVNSGTSALH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH
LALKALGVKPGDFVITSPFTFISSANVALFEGAIPVFADIDEKTFNVTPKTFKEAIERYH
HHHHHHCCCCCCEEEECCHHHHCCCCEEEEECCCCEEECCCCCEECCCHHHHHHHHHHHH
RKGFKTSKVKYSPFKPRFFVAVDIFGHPLDWDGINEVAAKWGIQIVEDSCEALGSEYKGK
HCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHCHHCCCC
RIGSFGAAGTFAFYPNKQITTGEGGIVVTDDPEIAKLVKSMRNQGRGENENWLEHVRIGY
CCCCCCCCCEEEECCCCEEECCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
NYRLDEVSAAIGVEQMKRIEEILEKRELVAKRYNELLKNVDGIETPFVDSYVSRKSWFVY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEE
VVKLAPEIDRNKVREYLQKNGVQCREYFKPVHLQPFYREQFGYEPGTFEITEKVSKRTLA
EEEECCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCEEE
IPFFNALTLEEQEYVVETLKKAIEFAG
EECHHHEECCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]