| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is glnA [H]
Identifier: 239618112
GI number: 239618112
Start: 1874878
End: 1876275
Strand: Direct
Name: glnA [H]
Synonym: Kole_1744
Alternate gene names: 239618112
Gene position: 1874878-1876275 (Clockwise)
Preceding gene: 239618094
Following gene: 239618116
Centisome position: 81.44
GC content: 43.63
Gene sequence:
>1398_bases ATGAAAGACTCGTTGAGGAAATATGTTGGAAACATAGATTTTATTGATTTGAAAGTTATCGATATTATTGGAAGGGTGCG GCACGTAATTCTTCCCGGAGATCGGTTGACCGACGAGCTTTTTGAAGAAGGCGTTGGTTTTGATGCCTCCAACTTTGGTT ATTCCTCTATAGAAAACAGCGATATGATAATGCTGCCGGATCCAGATACTGCCTTTGAAGATCCCTTCTTTGAGCGCAAA ACCCTTTCTTTTTTCTGCGATGTTCTCAGAACAGAAGATCGCAAGCCCTTTGAACACTATCCCAGAAACGTTCTAAGAGC GACGCTTGAGAAACTGAAATCCATTGGAGCTGCAGATGCGATGCTAGGCCCGGAACTGGAATTTCACATCTTTGAAGGAA TGAGTTACAGAGTTTCGGAAAATCAGGCTTATTTTAAGGTCGATGTTGCCGAAGGTTTCTGGAATAGCGGAGAGTTTTCA AATGCGAATGTTGTTGAGCGGAAGATGGGATATCATAGGTGCCCCCCTGCGGATGCCATGGCGAATTTCAGAAACGAAGC CGTTATGATTATGAATTCGATTGGAATTCCAGTTAAATACCATCATCATGAAGTGAGTTCTGCGCAACACGAAATAGAGT TTCGTTTTCAAAATGCCTTGAATAGTGCAGATTCAATAATCCTTGCCAGGTACATTCTTCAAAACCTGGCTTCCCGTTAC AACCTAAAGGTTACCTTTATGCCCAAACCGCTTTTCGAGGAAGCCGGAAACGGTATGCACATTCACCAGTACCTTGTAGA TGGAACAGGTAAAAACCTGTTCGCCGGTGATATTTATTGTGGACTTGGGGAAATGGCTTTACAGTACACCTCGGGGATTC TGAAACATTCGTTGACTGGAGCGCTTCTGGCCTTTACCAACCCATCGACTAACTCTTACAGAAGGCTCGTTCCAGGATTC GAAGCGCCTATATGTGCTGTTTTTGCTAAGGGGAACAGAAGCGCGGCTGTAAGAATTCCTGGTTACGTTAAAGATAAGCA TAAAGCAAGGATAGAATTCAGGACGATAGACGCCAGCTGCAATCCATACTATGGAATAGCGGCCATGCTGCTTGCGGGTG TGGACGGAGTCAAACAGAAACTCGACCATAAAGAGCTTGGATTTGGTCCCATCGAAACCAATATCTACAACATGAACGAC GAATATAGAAATAAGATCCGCTTCTTTCCTTCAAGTTTAGAAGAATCATTAAGAGGTCTTAAGGAAGACAATGAGTTTTT GAAACCCGGTTTTCCGGATGAGCTTATCAGGCAATGGATTTTAGTGAAGGAAGAAGAAGCGAGATATGTCAACAGCGTGC CAAGTCCCGCGGAATACCAGCTTTATTTTGACCTTTGA
Upstream 100 bases:
>100_bases AGCATATTTTACGCCTATAACGCATATTGGGTTTGAATAAAGGATGCAACAGGAATTAGAATTTTTGATGCAACCAATAA AACTTGACAGGAGGTACGGT
Downstream 100 bases:
>100_bases CAAATAACAAAGCTCTGCCGGGGGATTCCCGGGCAGAGCTTTGCTGTTGTCGTTCATTTCAAACGATCTCTATGAGGTTG ATTTCAAATACGAGATCTTT
Product: glutamine synthetase, type I
Products: NA
Alternate protein names: Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MKDSLRKYVGNIDFIDLKVIDIIGRVRHVILPGDRLTDELFEEGVGFDASNFGYSSIENSDMIMLPDPDTAFEDPFFERK TLSFFCDVLRTEDRKPFEHYPRNVLRATLEKLKSIGAADAMLGPELEFHIFEGMSYRVSENQAYFKVDVAEGFWNSGEFS NANVVERKMGYHRCPPADAMANFRNEAVMIMNSIGIPVKYHHHEVSSAQHEIEFRFQNALNSADSIILARYILQNLASRY NLKVTFMPKPLFEEAGNGMHIHQYLVDGTGKNLFAGDIYCGLGEMALQYTSGILKHSLTGALLAFTNPSTNSYRRLVPGF EAPICAVFAKGNRSAAVRIPGYVKDKHKARIEFRTIDASCNPYYGIAAMLLAGVDGVKQKLDHKELGFGPIETNIYNMND EYRNKIRFFPSSLEESLRGLKEDNEFLKPGFPDELIRQWILVKEEEARYVNSVPSPAEYQLYFDL
Sequences:
>Translated_465_residues MKDSLRKYVGNIDFIDLKVIDIIGRVRHVILPGDRLTDELFEEGVGFDASNFGYSSIENSDMIMLPDPDTAFEDPFFERK TLSFFCDVLRTEDRKPFEHYPRNVLRATLEKLKSIGAADAMLGPELEFHIFEGMSYRVSENQAYFKVDVAEGFWNSGEFS NANVVERKMGYHRCPPADAMANFRNEAVMIMNSIGIPVKYHHHEVSSAQHEIEFRFQNALNSADSIILARYILQNLASRY NLKVTFMPKPLFEEAGNGMHIHQYLVDGTGKNLFAGDIYCGLGEMALQYTSGILKHSLTGALLAFTNPSTNSYRRLVPGF EAPICAVFAKGNRSAAVRIPGYVKDKHKARIEFRTIDASCNPYYGIAAMLLAGVDGVKQKLDHKELGFGPIETNIYNMND EYRNKIRFFPSSLEESLRGLKEDNEFLKPGFPDELIRQWILVKEEEARYVNSVPSPAEYQLYFDL >Mature_465_residues MKDSLRKYVGNIDFIDLKVIDIIGRVRHVILPGDRLTDELFEEGVGFDASNFGYSSIENSDMIMLPDPDTAFEDPFFERK TLSFFCDVLRTEDRKPFEHYPRNVLRATLEKLKSIGAADAMLGPELEFHIFEGMSYRVSENQAYFKVDVAEGFWNSGEFS NANVVERKMGYHRCPPADAMANFRNEAVMIMNSIGIPVKYHHHEVSSAQHEIEFRFQNALNSADSIILARYILQNLASRY NLKVTFMPKPLFEEAGNGMHIHQYLVDGTGKNLFAGDIYCGLGEMALQYTSGILKHSLTGALLAFTNPSTNSYRRLVPGF EAPICAVFAKGNRSAAVRIPGYVKDKHKARIEFRTIDASCNPYYGIAAMLLAGVDGVKQKLDHKELGFGPIETNIYNMND EYRNKIRFFPSSLEESLRGLKEDNEFLKPGFPDELIRQWILVKEEEARYVNSVPSPAEYQLYFDL
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=463, Percent_Identity=40.1727861771058, Blast_Score=340, Evalue=2e-94, Organism=Escherichia coli, GI87081870, Length=410, Percent_Identity=27.5609756097561, Blast_Score=120, Evalue=2e-28,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 52854; Mature: 52854
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDSLRKYVGNIDFIDLKVIDIIGRVRHVILPGDRLTDELFEEGVGFDASNFGYSSIENS CCCHHHHHHCCCCEEEHHHHHHHHHHHEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC DMIMLPDPDTAFEDPFFERKTLSFFCDVLRTEDRKPFEHYPRNVLRATLEKLKSIGAADA CEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH MLGPELEFHIFEGMSYRVSENQAYFKVDVAEGFWNSGEFSNANVVERKMGYHRCPPADAM HCCCCEEEEEECCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCHHHH ANFRNEAVMIMNSIGIPVKYHHHEVSSAQHEIEFRFQNALNSADSIILARYILQNLASRY HHCCCCEEEEEECCCCCEEECCCHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC NLKVTFMPKPLFEEAGNGMHIHQYLVDGTGKNLFAGDIYCGLGEMALQYTSGILKHSLTG EEEEEECCCHHHHHCCCCEEEEEEEECCCCCCEEECCHHHCHHHHHHHHHHHHHHHHHCC ALLAFTNPSTNSYRRLVPGFEAPICAVFAKGNRSAAVRIPGYVKDKHKARIEFRTIDASC EEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEEECCCC NPYYGIAAMLLAGVDGVKQKLDHKELGFGPIETNIYNMNDEYRNKIRFFPSSLEESLRGL CCHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHHHCC KEDNEFLKPGFPDELIRQWILVKEEEARYVNSVPSPAEYQLYFDL CCCCCCCCCCCCHHHHHHHHEECCHHHHHHHCCCCCCEEEEEEEC >Mature Secondary Structure MKDSLRKYVGNIDFIDLKVIDIIGRVRHVILPGDRLTDELFEEGVGFDASNFGYSSIENS CCCHHHHHHCCCCEEEHHHHHHHHHHHEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC DMIMLPDPDTAFEDPFFERKTLSFFCDVLRTEDRKPFEHYPRNVLRATLEKLKSIGAADA CEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH MLGPELEFHIFEGMSYRVSENQAYFKVDVAEGFWNSGEFSNANVVERKMGYHRCPPADAM HCCCCEEEEEECCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCHHHH ANFRNEAVMIMNSIGIPVKYHHHEVSSAQHEIEFRFQNALNSADSIILARYILQNLASRY HHCCCCEEEEEECCCCCEEECCCHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC NLKVTFMPKPLFEEAGNGMHIHQYLVDGTGKNLFAGDIYCGLGEMALQYTSGILKHSLTG EEEEEECCCHHHHHCCCCEEEEEEEECCCCCCEEECCHHHCHHHHHHHHHHHHHHHHHCC ALLAFTNPSTNSYRRLVPGFEAPICAVFAKGNRSAAVRIPGYVKDKHKARIEFRTIDASC EEEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEEECCCC NPYYGIAAMLLAGVDGVKQKLDHKELGFGPIETNIYNMNDEYRNKIRFFPSSLEESLRGL CCHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHHHCC KEDNEFLKPGFPDELIRQWILVKEEEARYVNSVPSPAEYQLYFDL CCCCCCCCCCCCHHHHHHHHEECCHHHHHHHCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7678591 [H]