| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is hisJ [H]
Identifier: 239618042
GI number: 239618042
Start: 1805707
End: 1806486
Strand: Direct
Name: hisJ [H]
Synonym: Kole_1671
Alternate gene names: 239618042
Gene position: 1805707-1806486 (Clockwise)
Preceding gene: 239618039
Following gene: 239618043
Centisome position: 78.44
GC content: 43.08
Gene sequence:
>780_bases GTGGTGAGGAGAACAACTTTCTTGGTAGTCGTTGTAAGTATTCTTTTGGTGAGCTTGACGTTCGGAAGCTTGATCGATGA AATCAAAGAACGAGGTGTGTTGAGAGTAGGTCAGGACGCCGGGTATATGCCCTTGTATGGAACCGACATGTACGGTAACC GTATAGGACTTGAAGTTGACGTTCTCAAGATTATGGCAACACTTCTTGGTGTTAGACTCGAATTCGTGGTTGTGAACTGG GATGGCATTATTCCTGCGTTGCTGTCTGAAAAATTCGACATCATCTGGTCCGGGATGACAATAACAGATGAGCGGGCTAA AAAAGTTGATTTCAGCGAGCCTTACCTTAAGATTGGTCAGGTTCTTGTCTACAACAACAGGAAAATTAGTTCAGTTCCTT CTCTGGAAGAGCTGAATAATCCCTCTGTAAGAATTGCAGTGCAGCTAGGAACTACAGGAGATGAAGCGGCAAGGAGGTTG TTCCCCAGAGCAAAAATTTTAACCTTTGACTCCATGGATGAAGCAGCTTTTCAGGTTGCTTCGGGTAGGGCTGACTTCAC GGTCGTGGATTCTATATACGCACAGTACGTGGCGAAAAAATACGATCGTCTGAGTGTAGCTGATGGATTCTTGACCAGTG AAGAACTTGGGGTTGCGATTAGAAAAAATGATCCTGAAACATTAAATTGGATCAACAATTTTATCGAAGGACTTAAATCA TCAGGATTCATGGAACTCCTGGAAGAAAAGTGGTTTGTTGAATATGAACCAGAATTGTAA
Upstream 100 bases:
>100_bases CGGGTTTTTCCGTCGGCAGCACAGTTTGAACGTGCTGTAGATAAAGGAGGAACGCCGGGCGAGAAATCGCCCGGCTTTTT TTATATCAGAGGAGGTGTTT
Downstream 100 bases:
>100_bases GTATGAGGTGAAAAGATGCTGAAGTTCATGTCCAGAGTGCTTTTAGTGATCACGGTAACTTTGATATTCTTTTCTATTTA CGCCTCCCTTTCGAAGGTGT
Product: extracellular solute-binding protein family 3
Products: NA
Alternate protein names: HBP [H]
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MVRRTTFLVVVVSILLVSLTFGSLIDEIKERGVLRVGQDAGYMPLYGTDMYGNRIGLEVDVLKIMATLLGVRLEFVVVNW DGIIPALLSEKFDIIWSGMTITDERAKKVDFSEPYLKIGQVLVYNNRKISSVPSLEELNNPSVRIAVQLGTTGDEAARRL FPRAKILTFDSMDEAAFQVASGRADFTVVDSIYAQYVAKKYDRLSVADGFLTSEELGVAIRKNDPETLNWINNFIEGLKS SGFMELLEEKWFVEYEPEL
Sequences:
>Translated_259_residues MVRRTTFLVVVVSILLVSLTFGSLIDEIKERGVLRVGQDAGYMPLYGTDMYGNRIGLEVDVLKIMATLLGVRLEFVVVNW DGIIPALLSEKFDIIWSGMTITDERAKKVDFSEPYLKIGQVLVYNNRKISSVPSLEELNNPSVRIAVQLGTTGDEAARRL FPRAKILTFDSMDEAAFQVASGRADFTVVDSIYAQYVAKKYDRLSVADGFLTSEELGVAIRKNDPETLNWINNFIEGLKS SGFMELLEEKWFVEYEPEL >Mature_259_residues MVRRTTFLVVVVSILLVSLTFGSLIDEIKERGVLRVGQDAGYMPLYGTDMYGNRIGLEVDVLKIMATLLGVRLEFVVVNW DGIIPALLSEKFDIIWSGMTITDERAKKVDFSEPYLKIGQVLVYNNRKISSVPSLEELNNPSVRIAVQLGTTGDEAARRL FPRAKILTFDSMDEAAFQVASGRADFTVVDSIYAQYVAKKYDRLSVADGFLTSEELGVAIRKNDPETLNWINNFIEGLKS SGFMELLEEKWFVEYEPEL
Specific function: Component of the high-affinity histidine permease, a binding-protein-dependent transport system. The other components are proteins hisQ, hisM, and hisP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=257, Percent_Identity=31.9066147859922, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1787085, Length=250, Percent_Identity=26.4, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1787031, Length=249, Percent_Identity=27.710843373494, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1787088, Length=248, Percent_Identity=24.5967741935484, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788648, Length=230, Percent_Identity=26.9565217391304, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1788649, Length=232, Percent_Identity=25.8620689655172, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29138; Mature: 29138
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRTTFLVVVVSILLVSLTFGSLIDEIKERGVLRVGQDAGYMPLYGTDMYGNRIGLEVD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCCCCCCCCCCHH VLKIMATLLGVRLEFVVVNWDGIIPALLSEKFDIIWSGMTITDERAKKVDFSEPYLKIGQ HHHHHHHHHCCEEEEEEEECCCCHHHHHCCCCEEEECCCEECCHHHHCCCCCCCHHHHCC VLVYNNRKISSVPSLEELNNPSVRIAVQLGTTGDEAARRLFPRAKILTFDSMDEAAFQVA EEEECCCCCCCCCCHHHCCCCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCHHHHHHHH SGRADFTVVDSIYAQYVAKKYDRLSVADGFLTSEELGVAIRKNDPETLNWINNFIEGLKS CCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHCEEEECCCCHHHHHHHHHHHHHCC SGFMELLEEKWFVEYEPEL CCHHHHHHHCCEEEECCCC >Mature Secondary Structure MVRRTTFLVVVVSILLVSLTFGSLIDEIKERGVLRVGQDAGYMPLYGTDMYGNRIGLEVD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCCCCCCCCCCHH VLKIMATLLGVRLEFVVVNWDGIIPALLSEKFDIIWSGMTITDERAKKVDFSEPYLKIGQ HHHHHHHHHCCEEEEEEEECCCCHHHHHCCCCEEEECCCEECCHHHHCCCCCCCHHHHCC VLVYNNRKISSVPSLEELNNPSVRIAVQLGTTGDEAARRLFPRAKILTFDSMDEAAFQVA EEEECCCCCCCCCCHHHCCCCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCHHHHHHHH SGRADFTVVDSIYAQYVAKKYDRLSVADGFLTSEELGVAIRKNDPETLNWINNFIEGLKS CCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHCEEEECCCCHHHHHHHHHHHHHCC SGFMELLEEKWFVEYEPEL CCHHHHHHHCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1448614 [H]