| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617968
Identifier: 239617968
GI number: 239617968
Start: 1711928
End: 1712995
Strand: Direct
Name: 239617968
Synonym: Kole_1596
Alternate gene names: NA
Gene position: 1711928-1712995 (Clockwise)
Preceding gene: 239617956
Following gene: 239617971
Centisome position: 74.36
GC content: 42.98
Gene sequence:
>1068_bases ATGGCATTTGTGGAGATTTATCCGAATAGAGTGAAAATGAATACTTCCTATTTGAGGAATTTATGTGCTGGTTACGGTGT TGAAGTTGTTGGTGTAACCAAGGTTACCTGTGGAGATGAAAAAATCGCATCCGCGATAGTTGAGGCTGGTGTGAAGACAA TAGGTGAGTCCAGGATTGAGAATATCATCAGAATCAGAAATTCAGGTATGGATAACGCCAATTTTATGCTTTTACGTCCT CCTCAAAGGAGCAGAGTGTCTGCAGCCCTGGATGTTGCTGATGTCTTTCTGATATCGGATCTGGATATGCTGGGTTGCTT TATGGAAGCTCCCAATCTGAGAAAATACCATAGGATGATTTATATGATCGACACCGGTGACCTCCGGGAAGGTGTCTGGT ATAAAGAAGCTATTCCGGAACTTGAAGAGGCTGTAAAAATCGCTGGTCGATATTTAGCTGGTATTGGAACGAATCTTGGC TGTTACGGTGGGGTACTGGCAACTCCTGAAAAATTTGAAATATTGCTGGACCTTGGTGAAAAACTTTACAAAAGGACCGG TGTAAAGTTGGAGATTTATTCTGCGGGCAATACAGCTTCGTTACCTCTTATTGAAAACAACACGTGCCCGGAAGGGATAA ACCAGTTCAGATTGGGTGAATCGATCGTTTGCGGAACGGATGTTACCAACAACAGGGTGGTTCCAGGAACGAGGCAGGAT ACGTTCATACTCTACGGTGAGATCATAGAATTGAAAACAAAACCCTCGGTTCCGGAAGGTGAAATAGGCAGGGATGCTTT TGGAAGGATACCGGTTTTTGAAGACAAAGGGCCAAGATTGAGGGCCATTCTCGATATGGGTGAACTGGATGTTATTCCGT CAGGGCTTACACCGCTGGATTCGAAAATCTCAATATTGCATGCTTCCAGCGATCATCTTATAGTTGATTTGACGGAATCC AGTGTTGATTACAAAACAGGCGATATCATTGCCTTCAAAATGTCTTATGGTGCTTTACTAAGAGTGATGACCTCCAGATA TATTGAAAAGGTTTATCGATGGGAATAA
Upstream 100 bases:
>100_bases TAATAAATTATACGATAAATTGAGGTTTACAGTTCTCCTGTGTTGGTGCGAGGGTAGCTTTTTTACGAAATTGGTATAAT CGTTAAGGAGGTTGATATTT
Downstream 100 bases:
>100_bases TCCACTCGCTCATAGAGGTGCGAGTGGGTTATTTAACATCATAAAGTGCCTTGAGAATTTCCAGTGAGTTTAGGTCACCA AGTATATTGCCGTTTTTGTC
Product: alanine racemase domain protein
Products: NA
Alternate protein names: Alanine Racemase Domain Protein; Alanine Racemase Domain-Containing Protein; Alanine Racemase N-Terminal Domain Family; Alanine Racemase N-Terminal Domain Protein; Alanine Racemase-Like Protein; Ornithine Racemase; Alanine Racemase N-Terminal
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MAFVEIYPNRVKMNTSYLRNLCAGYGVEVVGVTKVTCGDEKIASAIVEAGVKTIGESRIENIIRIRNSGMDNANFMLLRP PQRSRVSAALDVADVFLISDLDMLGCFMEAPNLRKYHRMIYMIDTGDLREGVWYKEAIPELEEAVKIAGRYLAGIGTNLG CYGGVLATPEKFEILLDLGEKLYKRTGVKLEIYSAGNTASLPLIENNTCPEGINQFRLGESIVCGTDVTNNRVVPGTRQD TFILYGEIIELKTKPSVPEGEIGRDAFGRIPVFEDKGPRLRAILDMGELDVIPSGLTPLDSKISILHASSDHLIVDLTES SVDYKTGDIIAFKMSYGALLRVMTSRYIEKVYRWE
Sequences:
>Translated_355_residues MAFVEIYPNRVKMNTSYLRNLCAGYGVEVVGVTKVTCGDEKIASAIVEAGVKTIGESRIENIIRIRNSGMDNANFMLLRP PQRSRVSAALDVADVFLISDLDMLGCFMEAPNLRKYHRMIYMIDTGDLREGVWYKEAIPELEEAVKIAGRYLAGIGTNLG CYGGVLATPEKFEILLDLGEKLYKRTGVKLEIYSAGNTASLPLIENNTCPEGINQFRLGESIVCGTDVTNNRVVPGTRQD TFILYGEIIELKTKPSVPEGEIGRDAFGRIPVFEDKGPRLRAILDMGELDVIPSGLTPLDSKISILHASSDHLIVDLTES SVDYKTGDIIAFKMSYGALLRVMTSRYIEKVYRWE >Mature_354_residues AFVEIYPNRVKMNTSYLRNLCAGYGVEVVGVTKVTCGDEKIASAIVEAGVKTIGESRIENIIRIRNSGMDNANFMLLRPP QRSRVSAALDVADVFLISDLDMLGCFMEAPNLRKYHRMIYMIDTGDLREGVWYKEAIPELEEAVKIAGRYLAGIGTNLGC YGGVLATPEKFEILLDLGEKLYKRTGVKLEIYSAGNTASLPLIENNTCPEGINQFRLGESIVCGTDVTNNRVVPGTRQDT FILYGEIIELKTKPSVPEGEIGRDAFGRIPVFEDKGPRLRAILDMGELDVIPSGLTPLDSKISILHASSDHLIVDLTESS VDYKTGDIIAFKMSYGALLRVMTSRYIEKVYRWE
Specific function: Unknown
COG id: COG3457
COG function: function code E; Predicted amino acid racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39350; Mature: 39219
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFVEIYPNRVKMNTSYLRNLCAGYGVEVVGVTKVTCGDEKIASAIVEAGVKTIGESRIE CEEEEEECCEEEECHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH NIIRIRNSGMDNANFMLLRPPQRSRVSAALDVADVFLISDLDMLGCFMEAPNLRKYHRMI HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEE YMIDTGDLREGVWYKEAIPELEEAVKIAGRYLAGIGTNLGCYGGVLATPEKFEILLDLGE EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH KLYKRTGVKLEIYSAGNTASLPLIENNTCPEGINQFRLGESIVCGTDVTNNRVVPGTRQD HHHHHCCCEEEEEECCCCEECEEEECCCCHHHHHHHHCCCEEEECCCCCCCEECCCCCCC TFILYGEIIELKTKPSVPEGEIGRDAFGRIPVFEDKGPRLRAILDMGELDVIPSGLTPLD EEEEEEEEEEEECCCCCCCCCCCCHHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCC SKISILHASSDHLIVDLTESSVDYKTGDIIAFKMSYGALLRVMTSRYIEKVYRWE CCEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFVEIYPNRVKMNTSYLRNLCAGYGVEVVGVTKVTCGDEKIASAIVEAGVKTIGESRIE EEEEEECCEEEECHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH NIIRIRNSGMDNANFMLLRPPQRSRVSAALDVADVFLISDLDMLGCFMEAPNLRKYHRMI HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEE YMIDTGDLREGVWYKEAIPELEEAVKIAGRYLAGIGTNLGCYGGVLATPEKFEILLDLGE EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH KLYKRTGVKLEIYSAGNTASLPLIENNTCPEGINQFRLGESIVCGTDVTNNRVVPGTRQD HHHHHCCCEEEEEECCCCEECEEEECCCCHHHHHHHHCCCEEEECCCCCCCEECCCCCCC TFILYGEIIELKTKPSVPEGEIGRDAFGRIPVFEDKGPRLRAILDMGELDVIPSGLTPLD EEEEEEEEEEEECCCCCCCCCCCCHHHCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCC SKISILHASSDHLIVDLTESSVDYKTGDIIAFKMSYGALLRVMTSRYIEKVYRWE CCEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA