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The map label for this gene is ugpA [H]

Identifier: 239617796

GI number: 239617796

Start: 1514401

End: 1515267

Strand: Reverse

Name: ugpA [H]

Synonym: Kole_1421

Alternate gene names: 239617796

Gene position: 1515267-1514401 (Counterclockwise)

Preceding gene: 239617797

Following gene: 239617795

Centisome position: 65.82

GC content: 39.22

Gene sequence:

>867_bases
ATGCGGAGATGGGTACCATACCTCCTTCTCATTCCTACATTTTTGATCATCGTGCTATTTATTTATATACCAGCCGGATA
TTCTTTGAAAAATAGCTTTTACAAAGTTCTTCCATTTGGTAGAGGGATGCGCTACGTTGGATGGAGGAACTTTCAAAGGC
TTTTTGAAAATCCGGATTATATACATTCGGTTGTTTTTACGCTGATCTATGTAGTTGTTTCCGTCACGATTACTATTTTC
CTTGCATTCATAATCGCTTTATTGTTGAGTCAAAAGCTACCTGGAACAAGAGTTTATAGAACTCTTCTTTTTGCACCTTA
TGCGATTTCCCCAGCTATCGCAGGAACCTTATGGACATTTTTACTGAATCCTGTTGTGGGACATGTGAGCTACTTTTTCC
AAAAGGTTTTCGGACTTCAAGTCGAGTGGTTGACCACCAAGCCTTATGCTTTCTATGCTTTGATATTTGCAACAGTATGG
AAAATGCTTCCTTTTGATATGCTTTTCTACATCGCAAGTATCCAAGATGTGCCCGGAGAATTACTTGAGTCTGCCACTCT
TGATGGAGCCAAAACCATGACCAGAGTATGGAAAATTATTTTTCCTTTAGTTTCCCCGATAACCTTTTACCTCGTAATAA
TGAATGTTGTGACGACGATGTTTTCGTCTTTTGCGATAATCGATGTCATGACGAAGGGGGGACCCGGAAATTACACAACA
AATATGATTTACAGGTTATACCTTGATGCTTTTTACTTTCAGAAAGCCGGAGTTGCTTCCGCACAAAGCATCATTTTGAT
GGCGATAATGATAGTGGTTACCATAGTATATTTTACTTTTGGCGAACGCCGTGTCCATTATCAATGA

Upstream 100 bases:

>100_bases
GGTTATTGATAAAATTTGATTTAGTCCGTTCGGGGCGGATATATCCGCCCCGATTATAGTTCTATTTCAAATTTTTGTGT
GTCGTATTGGGGGTGCAAAG

Downstream 100 bases:

>100_bases
GGTGAGGCCTATGAGGATCTCTTCTAGAAAACGAATGAACACGATTTTAAGTGAGACTGTTCTTATAATAGTATCCTTTA
TCTTTATATTGCCTTTAATA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRRWVPYLLLIPTFLIIVLFIYIPAGYSLKNSFYKVLPFGRGMRYVGWRNFQRLFENPDYIHSVVFTLIYVVVSVTITIF
LAFIIALLLSQKLPGTRVYRTLLFAPYAISPAIAGTLWTFLLNPVVGHVSYFFQKVFGLQVEWLTTKPYAFYALIFATVW
KMLPFDMLFYIASIQDVPGELLESATLDGAKTMTRVWKIIFPLVSPITFYLVIMNVVTTMFSSFAIIDVMTKGGPGNYTT
NMIYRLYLDAFYFQKAGVASAQSIILMAIMIVVTIVYFTFGERRVHYQ

Sequences:

>Translated_288_residues
MRRWVPYLLLIPTFLIIVLFIYIPAGYSLKNSFYKVLPFGRGMRYVGWRNFQRLFENPDYIHSVVFTLIYVVVSVTITIF
LAFIIALLLSQKLPGTRVYRTLLFAPYAISPAIAGTLWTFLLNPVVGHVSYFFQKVFGLQVEWLTTKPYAFYALIFATVW
KMLPFDMLFYIASIQDVPGELLESATLDGAKTMTRVWKIIFPLVSPITFYLVIMNVVTTMFSSFAIIDVMTKGGPGNYTT
NMIYRLYLDAFYFQKAGVASAQSIILMAIMIVVTIVYFTFGERRVHYQ
>Mature_288_residues
MRRWVPYLLLIPTFLIIVLFIYIPAGYSLKNSFYKVLPFGRGMRYVGWRNFQRLFENPDYIHSVVFTLIYVVVSVTITIF
LAFIIALLLSQKLPGTRVYRTLLFAPYAISPAIAGTLWTFLLNPVVGHVSYFFQKVFGLQVEWLTTKPYAFYALIFATVW
KMLPFDMLFYIASIQDVPGELLESATLDGAKTMTRVWKIIFPLVSPITFYLVIMNVVTTMFSSFAIIDVMTKGGPGNYTT
NMIYRLYLDAFYFQKAGVASAQSIILMAIMIVVTIVYFTFGERRVHYQ

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=286, Percent_Identity=37.0629370629371, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI1790465, Length=251, Percent_Identity=26.6932270916335, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787570, Length=238, Percent_Identity=24.3697478991597, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33167; Mature: 33167

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA