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The map label for this gene is ugpE [H]

Identifier: 239617795

GI number: 239617795

Start: 1513551

End: 1514390

Strand: Reverse

Name: ugpE [H]

Synonym: Kole_1420

Alternate gene names: 239617795

Gene position: 1514390-1513551 (Counterclockwise)

Preceding gene: 239617796

Following gene: 239617791

Centisome position: 65.78

GC content: 38.45

Gene sequence:

>840_bases
ATGAGGATCTCTTCTAGAAAACGAATGAACACGATTTTAAGTGAGACTGTTCTTATAATAGTATCCTTTATCTTTATATT
GCCTTTAATATTGGCAGTGATCATGAGTATACAACCGCCTCAGAGTGTTTTTTCATTTCCACCCAAATTCTATCCCACGG
GGTTTCACTGGCAAAATTATGTTGATGCTTTCAAAACGGTTCCGTTTGGAAGGTTACTTTTAAACAGTACATTGGTTGCT
ATTATGATCACGGTTGGAAAATTAATTACAGGAACGCTGGCAGGCTATGCTTTTAGTAGTTTCAAATTCTTTGGAAAAAA
CTTTGCCTTCGCATTTCTTTTTGCCACACTGTTTTTACCTGCTGAAACGCTCATGATTGTTCCTCTCTTCTCTATAATGA
AAAAATTTGGTTGGGTGAATACTTATTGGGCTTTAACAATACCTTTTATGGCAAGCGCAACCAACACTTTTTTGATGCGA
CAGCATTTTTTAACAATCCCCAAAGAACTCGAGGATTCTGCGAAGATAGACGGCGCTGGACCAATGACGTATTTTGTGAA
GATTCTGCTCCCGCTTTCCAAATCAATGATAGGTGGAGCTGCTATTATAAATTTTGTATATGCTTGGAATTTGTATTTAT
GGCCATTGATAGTTACTATGGAAGATAGAATGAAGACCGTTCAAATTGGCGTAAAGATGCTAATAGACGCCGAAGGCGCC
AACAACTGGGGAATTATCATGGCTGGAACGGTTAGTGCGGTGTTTCCGACACTTCTTATGTTTTTCCTATTACAGAGTGT
CTTTGTGAAGAGTCTCGTAAGATCTGGAATCAAGGGTTAA

Upstream 100 bases:

>100_bases
TCCGCACAAAGCATCATTTTGATGGCGATAATGATAGTGGTTACCATAGTATATTTTACTTTTGGCGAACGCCGTGTCCA
TTATCAATGAGGTGAGGCCT

Downstream 100 bases:

>100_bases
TCCTTGTCTCATTATTGGGGGTCAGACCGGATGCTTTTTCGTACAACCCACAACCGACAACGATGATGAGCGAAGCGAGA
AGTAACATCATTGTCGAAGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MRISSRKRMNTILSETVLIIVSFIFILPLILAVIMSIQPPQSVFSFPPKFYPTGFHWQNYVDAFKTVPFGRLLLNSTLVA
IMITVGKLITGTLAGYAFSSFKFFGKNFAFAFLFATLFLPAETLMIVPLFSIMKKFGWVNTYWALTIPFMASATNTFLMR
QHFLTIPKELEDSAKIDGAGPMTYFVKILLPLSKSMIGGAAIINFVYAWNLYLWPLIVTMEDRMKTVQIGVKMLIDAEGA
NNWGIIMAGTVSAVFPTLLMFFLLQSVFVKSLVRSGIKG

Sequences:

>Translated_279_residues
MRISSRKRMNTILSETVLIIVSFIFILPLILAVIMSIQPPQSVFSFPPKFYPTGFHWQNYVDAFKTVPFGRLLLNSTLVA
IMITVGKLITGTLAGYAFSSFKFFGKNFAFAFLFATLFLPAETLMIVPLFSIMKKFGWVNTYWALTIPFMASATNTFLMR
QHFLTIPKELEDSAKIDGAGPMTYFVKILLPLSKSMIGGAAIINFVYAWNLYLWPLIVTMEDRMKTVQIGVKMLIDAEGA
NNWGIIMAGTVSAVFPTLLMFFLLQSVFVKSLVRSGIKG
>Mature_279_residues
MRISSRKRMNTILSETVLIIVSFIFILPLILAVIMSIQPPQSVFSFPPKFYPTGFHWQNYVDAFKTVPFGRLLLNSTLVA
IMITVGKLITGTLAGYAFSSFKFFGKNFAFAFLFATLFLPAETLMIVPLFSIMKKFGWVNTYWALTIPFMASATNTFLMR
QHFLTIPKELEDSAKIDGAGPMTYFVKILLPLSKSMIGGAAIINFVYAWNLYLWPLIVTMEDRMKTVQIGVKMLIDAEGA
NNWGIIMAGTVSAVFPTLLMFFLLQSVFVKSLVRSGIKG

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=274, Percent_Identity=36.8613138686131, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1787571, Length=260, Percent_Identity=28.0769230769231, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790464, Length=214, Percent_Identity=26.1682242990654, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31300; Mature: 31300

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRISSRKRMNTILSETVLIIVSFIFILPLILAVIMSIQPPQSVFSFPPKFYPTGFHWQNY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHH
VDAFKTVPFGRLLLNSTLVAIMITVGKLITGTLAGYAFSSFKFFGKNFAFAFLFATLFLP
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AETLMIVPLFSIMKKFGWVNTYWALTIPFMASATNTFLMRQHFLTIPKELEDSAKIDGAG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
PMTYFVKILLPLSKSMIGGAAIINFVYAWNLYLWPLIVTMEDRMKTVQIGVKMLIDAEGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
NNWGIIMAGTVSAVFPTLLMFFLLQSVFVKSLVRSGIKG
CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA