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The map label for this gene is yddV [C]

Identifier: 239617496

GI number: 239617496

Start: 1180318

End: 1180911

Strand: Reverse

Name: yddV [C]

Synonym: Kole_1112

Alternate gene names: 239617496

Gene position: 1180911-1180318 (Counterclockwise)

Preceding gene: 239617497

Following gene: 239617485

Centisome position: 51.3

GC content: 40.4

Gene sequence:

>594_bases
ATGACTTTTGATGAATGGAAACTCGAACTCGAACAGGCAGCCAGAGGAGGGCGCCTCACCATCGGAAATCTGGACATAGA
CAACTTCGGGCCCCTAAACGAGAAATTCGGGCGTGAGTGTGGAGACAAAATACTGAAATTTTTTGGAGAAATCCTGAAAC
AAAATCTTCCAGAAAAGGTATCTTTTGTACGTTTTGGTGACGAATTTTTCGTATACTCTACTGAATACTCCCTTGAAAAT
CTGTTCATGGAAATACAGGAAATAAGGCAGATTATCGAGGATGGGAAGGTTAAATGTAATGGAAAAGAGATCACTTTCAC
CGTTTCCGGATCCGTAGGGGAATACCCAAGGAACGCTTCGTCAATAGAAAAATTACTCAATCTCCTTTCAGAAGGAATGC
GAAAAGCCAAGGAGAAATTGAACCAGATAGTCTTCGCACCTATGGAAAGAGAACAAAAAATGGTCTTAAAATCCAATTAT
TATTTTAAGTCTCAACTCGATGGACTCTCGAAATTGGCAAAAATGCTCAATAGAACGGAATCTTCGCTTCTTAGAGAAGC
CCTCGATGACCTGTTGAGAAAATACAAACTCTGA

Upstream 100 bases:

>100_bases
TACTAAGTTCACCCCAAATTTACACAAATGAACTGAATCGGAAATATTGGATATGTATATTGATATATGTACATATATCT
ATATATAAAGAGGTGTTTTT

Downstream 100 bases:

>100_bases
TAAAAATTCAAGCTGCTAAAGAACGGGTGGTCATACCACCCGTTTTTTTGCGAAACGAGGACAGGTTATCCTATCCACTT
TGGGCCTTCCATGTCATAGA

Product: diguanylate cyclase

Products: NA

Alternate protein names: Diguanylate Cyclase With PAS/PAC Sensor; GGDEF Family Protein

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MTFDEWKLELEQAARGGRLTIGNLDIDNFGPLNEKFGRECGDKILKFFGEILKQNLPEKVSFVRFGDEFFVYSTEYSLEN
LFMEIQEIRQIIEDGKVKCNGKEITFTVSGSVGEYPRNASSIEKLLNLLSEGMRKAKEKLNQIVFAPMEREQKMVLKSNY
YFKSQLDGLSKLAKMLNRTESSLLREALDDLLRKYKL

Sequences:

>Translated_197_residues
MTFDEWKLELEQAARGGRLTIGNLDIDNFGPLNEKFGRECGDKILKFFGEILKQNLPEKVSFVRFGDEFFVYSTEYSLEN
LFMEIQEIRQIIEDGKVKCNGKEITFTVSGSVGEYPRNASSIEKLLNLLSEGMRKAKEKLNQIVFAPMEREQKMVLKSNY
YFKSQLDGLSKLAKMLNRTESSLLREALDDLLRKYKL
>Mature_196_residues
TFDEWKLELEQAARGGRLTIGNLDIDNFGPLNEKFGRECGDKILKFFGEILKQNLPEKVSFVRFGDEFFVYSTEYSLENL
FMEIQEIRQIIEDGKVKCNGKEITFTVSGSVGEYPRNASSIEKLLNLLSEGMRKAKEKLNQIVFAPMEREQKMVLKSNYY
FKSQLDGLSKLAKMLNRTESSLLREALDDLLRKYKL

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22804; Mature: 22672

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFDEWKLELEQAARGGRLTIGNLDIDNFGPLNEKFGRECGDKILKFFGEILKQNLPEKV
CCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SFVRFGDEFFVYSTEYSLENLFMEIQEIRQIIEDGKVKCNGKEITFTVSGSVGEYPRNAS
HHHEECCEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCCCHH
SIEKLLNLLSEGMRKAKEKLNQIVFAPMEREQKMVLKSNYYFKSQLDGLSKLAKMLNRTE
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SSLLREALDDLLRKYKL
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFDEWKLELEQAARGGRLTIGNLDIDNFGPLNEKFGRECGDKILKFFGEILKQNLPEKV
CCHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SFVRFGDEFFVYSTEYSLENLFMEIQEIRQIIEDGKVKCNGKEITFTVSGSVGEYPRNAS
HHHEECCEEEEEECHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCCCHH
SIEKLLNLLSEGMRKAKEKLNQIVFAPMEREQKMVLKSNYYFKSQLDGLSKLAKMLNRTE
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
SSLLREALDDLLRKYKL
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA