| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617485
Identifier: 239617485
GI number: 239617485
Start: 1168971
End: 1170053
Strand: Reverse
Name: 239617485
Synonym: Kole_1101
Alternate gene names: NA
Gene position: 1170053-1168971 (Counterclockwise)
Preceding gene: 239617496
Following gene: 239617480
Centisome position: 50.82
GC content: 42.29
Gene sequence:
>1083_bases ATGAAAGAAAAGGGAGTTAAACGGCAAGCCTCATCAAAGAATATAGTCTACGCGATTCTTATAAGTGTTATCGTTATTTT AGCTATATTGGCTCTTACAGGAGAAGAACTGGATCTTTCTCTTTTCCTGAAGCTTCCGTTTCAGTGGATCCTTGGCGCAC TTCTGTTGTATTTGATAGCATTGTCTATAAACGCCCTCAGAACCCTTCTGCTTCTCAGAGCCTTTGGAATAAAATTCAAA TATTCATATGCTTTCACTAACAATCTCCTCATGCAGTACTTCAACAACATAACTCCCTTCGCTGCTGGTGGGCAGCCATT CCAGATATACGATTTAACCAAAAAAGGCATAGACGTTACAACAGCCGCGGCTGTAATCGTCTCACGTTATGTTATGACAA ATATAGCCATACTTACCCTGGCGATCTTCTTTCTTCCTAAATACTGGAGAAGTTTTTTGAATATACCAGGAATTGGAATT CTTGCTTTTCTGGGTGCTTTTTTTACCTTTGCCCTTTTGGTGTTGTTGACTACTCTCTCTTATTCCCGGAAACTTCTCAC AAGACTCGTAGATCTTCTTGTAAAACCAAAGTTTTTACGTAAGTTATTTGCGAAGTGGCTGAACTGCGAACCCGACGAAG TTCGCGAGAGACTGCTTAAAAACTTTGAGGAATTTAACTATTACATGCATTTCATCTGGCGCAAAGGCCCTCACTACATG TTCGTGGATGTTGGGCTCGCTATTCTTTTCAGCATGGTTTTCAAATTCATCCTGTATTTCCTCATCATCGGGCTATCAAA GACCTCTGGAAAACCTGTAACGGCTTCTTTTCTTGATGTTTGGGGGGTCCAGGAGCTGCTGTTTCTTGTGGCTTTTTATG TACCGACCCCCGGTGCGAGCGGCGCGCTCGAAGCAGGGCTTTTTTTCATGCTGAAAGACGCTGTCCCCAAAGATCTTATA GCTATAAGCGTTACCCTCTGGAGGTTGTTGACTTATCATTTTGTGATCGTTGTGGGTTCCCTGGTATTTTTTATTCAACA GGTCAGAAGAGGGAAGAACACGAAAGCCAAGATAGATACCTGA
Upstream 100 bases:
>100_bases ATATTCGGTGGTAATGACCTCACGTACTGGAAACACTAAAAAGCGAAAAATAGTTGGCATGTTATAATTTCAAAGCAAAA AAATGCCAAAAGGAGCATGT
Downstream 100 bases:
>100_bases TTTCAAAACAAGAATAAGTATCGATGATGCATTAATACAAAATAGCAAAAAAGCGGAACCTTTATAAAAAGGTTCCGCTT TATCTGCTACAAATCTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKEKGVKRQASSKNIVYAILISVIVILAILALTGEELDLSLFLKLPFQWILGALLLYLIALSINALRTLLLLRAFGIKFK YSYAFTNNLLMQYFNNITPFAAGGQPFQIYDLTKKGIDVTTAAAVIVSRYVMTNIAILTLAIFFLPKYWRSFLNIPGIGI LAFLGAFFTFALLVLLTTLSYSRKLLTRLVDLLVKPKFLRKLFAKWLNCEPDEVRERLLKNFEEFNYYMHFIWRKGPHYM FVDVGLAILFSMVFKFILYFLIIGLSKTSGKPVTASFLDVWGVQELLFLVAFYVPTPGASGALEAGLFFMLKDAVPKDLI AISVTLWRLLTYHFVIVVGSLVFFIQQVRRGKNTKAKIDT
Sequences:
>Translated_360_residues MKEKGVKRQASSKNIVYAILISVIVILAILALTGEELDLSLFLKLPFQWILGALLLYLIALSINALRTLLLLRAFGIKFK YSYAFTNNLLMQYFNNITPFAAGGQPFQIYDLTKKGIDVTTAAAVIVSRYVMTNIAILTLAIFFLPKYWRSFLNIPGIGI LAFLGAFFTFALLVLLTTLSYSRKLLTRLVDLLVKPKFLRKLFAKWLNCEPDEVRERLLKNFEEFNYYMHFIWRKGPHYM FVDVGLAILFSMVFKFILYFLIIGLSKTSGKPVTASFLDVWGVQELLFLVAFYVPTPGASGALEAGLFFMLKDAVPKDLI AISVTLWRLLTYHFVIVVGSLVFFIQQVRRGKNTKAKIDT >Mature_360_residues MKEKGVKRQASSKNIVYAILISVIVILAILALTGEELDLSLFLKLPFQWILGALLLYLIALSINALRTLLLLRAFGIKFK YSYAFTNNLLMQYFNNITPFAAGGQPFQIYDLTKKGIDVTTAAAVIVSRYVMTNIAILTLAIFFLPKYWRSFLNIPGIGI LAFLGAFFTFALLVLLTTLSYSRKLLTRLVDLLVKPKFLRKLFAKWLNCEPDEVRERLLKNFEEFNYYMHFIWRKGPHYM FVDVGLAILFSMVFKFILYFLIIGLSKTSGKPVTASFLDVWGVQELLFLVAFYVPTPGASGALEAGLFFMLKDAVPKDLI AISVTLWRLLTYHFVIVVGSLVFFIQQVRRGKNTKAKIDT
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40945; Mature: 40945
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKGVKRQASSKNIVYAILISVIVILAILALTGEELDLSLFLKLPFQWILGALLLYLIA CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHH LSINALRTLLLLRAFGIKFKYSYAFTNNLLMQYFNNITPFAAGGQPFQIYDLTKKGIDVT HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHH TAAAVIVSRYVMTNIAILTLAIFFLPKYWRSFLNIPGIGILAFLGAFFTFALLVLLTTLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH YSRKLLTRLVDLLVKPKFLRKLFAKWLNCEPDEVRERLLKNFEEFNYYMHFIWRKGPHYM HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEE FVDVGLAILFSMVFKFILYFLIIGLSKTSGKPVTASFLDVWGVQELLFLVAFYVPTPGAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC GALEAGLFFMLKDAVPKDLIAISVTLWRLLTYHFVIVVGSLVFFIQQVRRGKNTKAKIDT CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKEKGVKRQASSKNIVYAILISVIVILAILALTGEELDLSLFLKLPFQWILGALLLYLIA CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHH LSINALRTLLLLRAFGIKFKYSYAFTNNLLMQYFNNITPFAAGGQPFQIYDLTKKGIDVT HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHH TAAAVIVSRYVMTNIAILTLAIFFLPKYWRSFLNIPGIGILAFLGAFFTFALLVLLTTLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH YSRKLLTRLVDLLVKPKFLRKLFAKWLNCEPDEVRERLLKNFEEFNYYMHFIWRKGPHYM HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCEE FVDVGLAILFSMVFKFILYFLIIGLSKTSGKPVTASFLDVWGVQELLFLVAFYVPTPGAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC GALEAGLFFMLKDAVPKDLIAISVTLWRLLTYHFVIVVGSLVFFIQQVRRGKNTKAKIDT CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA