| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617376
Identifier: 239617376
GI number: 239617376
Start: 1040658
End: 1042010
Strand: Reverse
Name: 239617376
Synonym: Kole_0986
Alternate gene names: NA
Gene position: 1042010-1040658 (Counterclockwise)
Preceding gene: 239617377
Following gene: 239617375
Centisome position: 45.26
GC content: 43.98
Gene sequence:
>1353_bases ATGAAAAGGTCTTTTTGGTTGTTAGTACTGTTGCTTATGCTGGGGACTTCATTGCTTGCGGTTCAAACAATTAAACTTGT TGCCTGGACTGTTGGACCAGATGATCCATCCATCAACAGAAAGCTGAACCTCGATAGAGCAGCCGAAATGCTCAATGCTA TGCTGGAGGCTTCAGGTTCGGACATAAGAATCGAACTCGTATCTTCTTTTGACTCGACGGATTGGTCTTCCTACAAACAG AGAGCGTTAATCGCTTTCCAATCCCCGGACCAGCAATTGGACATCATCACAAGTGGACATGACGATATCGGCATGTGGGC AAAAGCCGGATACGTCAGACCTCTTGACGAATACATCAAAAAGTTCTGGAATCTTGGATTCTACGACATTATTCCGTCAC TGTGGGAAGCCATGAAATTCAAAGGAAAGATTTATGGTGTTCCACAGGACACTGAAGCAAGACCTTTCTACGCAAGAAAA GACAAACTTCTGGCTATGGGTTACACTGAAGAAGAAATAGCTGACATGATGGAAAAATTTGCCACTGGTGAATACACACT TTACGACGCCGTGAAGATATCACAGGAAGCAATCAAAGCAGGAGTCGTTAAGTGGGGAATCTGGCACAGACCAAAACCCG GTGTGGATTACTTCCAGATCTTCAATTCCTTCGGTGTTCAGTATTATGATCCCGATCAGGGTAAATTGGTATTCGACAAG GCCGGTTATTTGAAAGCATTCCAGTTCTTCTATGACATTTGCAATACCTACAAAGTCACTCCAAAGAACCTCATCGGTAC ACCATGGAACACAATACACAGATCCTTTGCTGGTCCCGAAGGAGACGTACTCTTCTACCTCGGAGGAACCTGGAACGTTG CCGAATGGATGAATATGTTCGGTTACACAAAAGAAGATATAAAAGCGAAGTTTACCTACACTCTCGTACCCAGCGCTGAA AAAGGGAAACCCGGTAACACCATTTCCCATCCGGTTGCATACATGGTTACATCAAAATCAAAATATCCAGAACTTGCCAC ACTACTTATTCTTCTCGCGTCCGATGCAAGGTTGAACGCAATTCACGCAGTAAACAGCGGTCACCTGGCAATCAGATATG CTGAACTTTCACTGCCAATGTACGCGGAAGATGATTTCTTAACCGACACCGCAAAGAAACTCCTACCCTACGCCACATTC GCTCCTAACAACGACAGATTCAATGAATACAACAAAATCATATTCGATGCTATGACCGGTCTTGAATCCGGAAAGATGAC TCCTAAATTTGCCGTAGAATGGGTAGTTCAGCGTTTGAGAGCCCAGCTAAAGGATGAAGTAATAATTAAGTAA
Upstream 100 bases:
>100_bases CGGTTCAAATCAAAAGGGTTAGCCATGTATAGGTTCCGTGGAGAAAGGGTGCTTTTATTTTGGATTGTTTATCAAAATTG AAAGAAGGAGGGAATTACTT
Downstream 100 bases:
>100_bases TCACCGTTCTTTCCCGTCCTCGCACACTCGTTTTGAGTGTGCGGGGTTATTTCCCTTGTTTTTGGACTCTTTTTGAAGGG AGGAAGTGCTTCTTGTTGCA
Product: extracellular solute-binding protein family 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MKRSFWLLVLLLMLGTSLLAVQTIKLVAWTVGPDDPSINRKLNLDRAAEMLNAMLEASGSDIRIELVSSFDSTDWSSYKQ RALIAFQSPDQQLDIITSGHDDIGMWAKAGYVRPLDEYIKKFWNLGFYDIIPSLWEAMKFKGKIYGVPQDTEARPFYARK DKLLAMGYTEEEIADMMEKFATGEYTLYDAVKISQEAIKAGVVKWGIWHRPKPGVDYFQIFNSFGVQYYDPDQGKLVFDK AGYLKAFQFFYDICNTYKVTPKNLIGTPWNTIHRSFAGPEGDVLFYLGGTWNVAEWMNMFGYTKEDIKAKFTYTLVPSAE KGKPGNTISHPVAYMVTSKSKYPELATLLILLASDARLNAIHAVNSGHLAIRYAELSLPMYAEDDFLTDTAKKLLPYATF APNNDRFNEYNKIIFDAMTGLESGKMTPKFAVEWVVQRLRAQLKDEVIIK
Sequences:
>Translated_450_residues MKRSFWLLVLLLMLGTSLLAVQTIKLVAWTVGPDDPSINRKLNLDRAAEMLNAMLEASGSDIRIELVSSFDSTDWSSYKQ RALIAFQSPDQQLDIITSGHDDIGMWAKAGYVRPLDEYIKKFWNLGFYDIIPSLWEAMKFKGKIYGVPQDTEARPFYARK DKLLAMGYTEEEIADMMEKFATGEYTLYDAVKISQEAIKAGVVKWGIWHRPKPGVDYFQIFNSFGVQYYDPDQGKLVFDK AGYLKAFQFFYDICNTYKVTPKNLIGTPWNTIHRSFAGPEGDVLFYLGGTWNVAEWMNMFGYTKEDIKAKFTYTLVPSAE KGKPGNTISHPVAYMVTSKSKYPELATLLILLASDARLNAIHAVNSGHLAIRYAELSLPMYAEDDFLTDTAKKLLPYATF APNNDRFNEYNKIIFDAMTGLESGKMTPKFAVEWVVQRLRAQLKDEVIIK >Mature_450_residues MKRSFWLLVLLLMLGTSLLAVQTIKLVAWTVGPDDPSINRKLNLDRAAEMLNAMLEASGSDIRIELVSSFDSTDWSSYKQ RALIAFQSPDQQLDIITSGHDDIGMWAKAGYVRPLDEYIKKFWNLGFYDIIPSLWEAMKFKGKIYGVPQDTEARPFYARK DKLLAMGYTEEEIADMMEKFATGEYTLYDAVKISQEAIKAGVVKWGIWHRPKPGVDYFQIFNSFGVQYYDPDQGKLVFDK AGYLKAFQFFYDICNTYKVTPKNLIGTPWNTIHRSFAGPEGDVLFYLGGTWNVAEWMNMFGYTKEDIKAKFTYTLVPSAE KGKPGNTISHPVAYMVTSKSKYPELATLLILLASDARLNAIHAVNSGHLAIRYAELSLPMYAEDDFLTDTAKKLLPYATF APNNDRFNEYNKIIFDAMTGLESGKMTPKFAVEWVVQRLRAQLKDEVIIK
Specific function: Unknown
COG id: COG2182
COG function: function code G; Maltose-binding periplasmic proteins/domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51204; Mature: 51204
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSFWLLVLLLMLGTSLLAVQTIKLVAWTVGPDDPSINRKLNLDRAAEMLNAMLEASGS CCCHHHHHHHHHHHCCHHHHHHHEEEEEEEECCCCCCCCCEECHHHHHHHHHHHHHCCCC DIRIELVSSFDSTDWSSYKQRALIAFQSPDQQLDIITSGHDDIGMWAKAGYVRPLDEYIK CEEEEEEECCCCCCHHHHHCEEEEEECCCCCCEEEEECCCCCCCHHHHCCCCCCHHHHHH KFWNLGFYDIIPSLWEAMKFKGKIYGVPQDTEARPFYARKDKLLAMGYTEEEIADMMEKF HHHCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEECCCCEEEECCCHHHHHHHHHHH ATGEYTLYDAVKISQEAIKAGVVKWGIWHRPKPGVDYFQIFNSFGVQYYDPDQGKLVFDK CCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEC AGYLKAFQFFYDICNTYKVTPKNLIGTPWNTIHRSFAGPEGDVLFYLGGTWNVAEWMNMF CCHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH GYTKEDIKAKFTYTLVPSAEKGKPGNTISHPVAYMVTSKSKYPELATLLILLASDARLNA CCCHHHCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEE IHAVNSGHLAIRYAELSLPMYAEDDFLTDTAKKLLPYATFAPNNDRFNEYNKIIFDAMTG EEEECCCCEEEEEEEECCCEECCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHC LESGKMTPKFAVEWVVQRLRAQLKDEVIIK CCCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKRSFWLLVLLLMLGTSLLAVQTIKLVAWTVGPDDPSINRKLNLDRAAEMLNAMLEASGS CCCHHHHHHHHHHHCCHHHHHHHEEEEEEEECCCCCCCCCEECHHHHHHHHHHHHHCCCC DIRIELVSSFDSTDWSSYKQRALIAFQSPDQQLDIITSGHDDIGMWAKAGYVRPLDEYIK CEEEEEEECCCCCCHHHHHCEEEEEECCCCCCEEEEECCCCCCCHHHHCCCCCCHHHHHH KFWNLGFYDIIPSLWEAMKFKGKIYGVPQDTEARPFYARKDKLLAMGYTEEEIADMMEKF HHHCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCCCEECCCCEEEECCCHHHHHHHHHHH ATGEYTLYDAVKISQEAIKAGVVKWGIWHRPKPGVDYFQIFNSFGVQYYDPDQGKLVFDK CCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEC AGYLKAFQFFYDICNTYKVTPKNLIGTPWNTIHRSFAGPEGDVLFYLGGTWNVAEWMNMF CCHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH GYTKEDIKAKFTYTLVPSAEKGKPGNTISHPVAYMVTSKSKYPELATLLILLASDARLNA CCCHHHCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEE IHAVNSGHLAIRYAELSLPMYAEDDFLTDTAKKLLPYATFAPNNDRFNEYNKIIFDAMTG EEEECCCCEEEEEEEECCCEECCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHC LESGKMTPKFAVEWVVQRLRAQLKDEVIIK CCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA