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The map label for this gene is ydiF [H]

Identifier: 239617260

GI number: 239617260

Start: 913125

End: 914729

Strand: Direct

Name: ydiF [H]

Synonym: Kole_0868

Alternate gene names: 239617260

Gene position: 913125-914729 (Clockwise)

Preceding gene: 239617259

Following gene: 239617262

Centisome position: 39.66

GC content: 42.18

Gene sequence:

>1605_bases
TTGCTGCATATAAAAAATCTTCGAATAGAGTTCGATGAATTTATTCTGATAGATAATATCTCTTTCGATGTTGTTCCGGG
TGAGGTTCTTGCTATAACAGGACCAAATGGTTGCGGGAAAACTTCTTTAATACGCGCCATAAAAGGAGAGCTTCCTTATG
AAGGAACTGTGTTTGTCGAAAAGGGAAAGAAGATAGCCTTCGTACCTCAGGAAAATCCGGAGTCAAATGAAAGAGTTGTC
GAATTTATTTTACAAGAGTTTCCGGAGATTCACCGCATAAAGAAACTCCTGGAATCCCAAGTCGACGACCCGCTCATTTG
TGCGAACCTGCTCGACGAATATGCCGGAATGAGTGGTTTCGAGCTTGAAGATCGTATTGTAAGGGAACTTCTAAGATTAG
GATTCGGAAGACAGGAACTCGAAAAAAGTGTTTCCGATTTTTCTGAAGGAGAAAAACGGTTACTCCTTGTAACCCGCGCA
ATACTTAAAGACCCGGATTTGATTATCCTGGACGAACCTACGAACCACCTTGACATTTCAATGATCATGCGACTGGAAGA
GGAAATACTCAGGTTGAAAAAATCAGGAAAAGCATTTATCGTAATAAGCCACGACAGAACGTTTGTCGACAAAATCGCTG
ATCGGACGCTATTTATACAACGCGGAAAAGCGGTTACGGTAAGAGGTGGGTTCAGCCTTATGAGAGCCCATCTTCAAAAC
AAATTTGAATCCGATTTAAGGCGTGCACAGGAAATCTCCCGAAAAATCCGGCAACTCGAGCAGGAGGTGGCCAGGCGAAA
AGAGTGGTCGAGGAAGAAAGAATCTCAGAAAAAATTCGCAGACAAGGTAATGAACAAAGGGTACATCGGCAGGAAATCTG
CCAAACTGGCAAAAAGGGCGAGAGCTGTTGAGAAGAGGGTAGAAGAACTAATCGATAAATTGAAAGCCGAAAAGCCCTTC
ATCGAAAAAAGGTTGAAAATGCTTTTCCCGTATTATGAGGTTGCGGAAAGAAAATTGTTGAGCTGTGAAAATTTGAGCTT
TTCTTACGATACGAAGGATTTATTCTCTGATATAAACTTAGACCTAACCACTAAAGACAGAGCTGCAATAGTTGGGCCCA
ATGGAACTGGGAAAACAACCCTGCTGAAATGCTTGATTGGAGCCCTGAAACCAAAAACAGGGCAGATTTATATGAACAAG
AACGTAAATTGGGTTTATCTGCCCCAGAGAATCGAAACTTTTTTCCAGAAAGAGATCCTGCTGGATACCTTCATGGTTTT
CGGCATATCTGAAACTGAGATAAGGACTATACTTGGGGCTGCAAAGTTCAGAAGGGAAAAGGTTTTTCAGCGAGTTGACA
CCCTGAGCAAGGGTGAACTCACACGAGCTGCGATAGTATGGGCTACACTTTCTAAAGCTGAATTTCTGTTTATGGATGAA
CCGACGAATCACCTGGACATTGAATCTCTTGAAGTGCTGGATGTCTTAATCGAAAATTTCAAGGGAGGAATGCTGTTTAT
CAGTCACGACAGGCATTTCATCTCAAGGCATGCTCGAGAAGTGTATTATCTGTCGGATAAAAAACTTTCGAGGATGAACT
TGTAA

Upstream 100 bases:

>100_bases
TACAGACCCTTAACTTTTATTCTTAACACCAACCTATTTAATTGAACCCGTTCAATTCGGGTAATTTGTCGTGTTTTGTG
CCTTACGAGGAGGTGGTTTT

Downstream 100 bases:

>100_bases
AAAGGTGCGGGAAAATACCCGCGCCTTTTTTCAAAAGCAGGTTTTAGACGAATACAGAAGTTCAAAGGTTGAACAAAAAA
AGGGACCCTCAAGGGTCCCT

Product: ABC transporter related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MLHIKNLRIEFDEFILIDNISFDVVPGEVLAITGPNGCGKTSLIRAIKGELPYEGTVFVEKGKKIAFVPQENPESNERVV
EFILQEFPEIHRIKKLLESQVDDPLICANLLDEYAGMSGFELEDRIVRELLRLGFGRQELEKSVSDFSEGEKRLLLVTRA
ILKDPDLIILDEPTNHLDISMIMRLEEEILRLKKSGKAFIVISHDRTFVDKIADRTLFIQRGKAVTVRGGFSLMRAHLQN
KFESDLRRAQEISRKIRQLEQEVARRKEWSRKKESQKKFADKVMNKGYIGRKSAKLAKRARAVEKRVEELIDKLKAEKPF
IEKRLKMLFPYYEVAERKLLSCENLSFSYDTKDLFSDINLDLTTKDRAAIVGPNGTGKTTLLKCLIGALKPKTGQIYMNK
NVNWVYLPQRIETFFQKEILLDTFMVFGISETEIRTILGAAKFRREKVFQRVDTLSKGELTRAAIVWATLSKAEFLFMDE
PTNHLDIESLEVLDVLIENFKGGMLFISHDRHFISRHAREVYYLSDKKLSRMNL

Sequences:

>Translated_534_residues
MLHIKNLRIEFDEFILIDNISFDVVPGEVLAITGPNGCGKTSLIRAIKGELPYEGTVFVEKGKKIAFVPQENPESNERVV
EFILQEFPEIHRIKKLLESQVDDPLICANLLDEYAGMSGFELEDRIVRELLRLGFGRQELEKSVSDFSEGEKRLLLVTRA
ILKDPDLIILDEPTNHLDISMIMRLEEEILRLKKSGKAFIVISHDRTFVDKIADRTLFIQRGKAVTVRGGFSLMRAHLQN
KFESDLRRAQEISRKIRQLEQEVARRKEWSRKKESQKKFADKVMNKGYIGRKSAKLAKRARAVEKRVEELIDKLKAEKPF
IEKRLKMLFPYYEVAERKLLSCENLSFSYDTKDLFSDINLDLTTKDRAAIVGPNGTGKTTLLKCLIGALKPKTGQIYMNK
NVNWVYLPQRIETFFQKEILLDTFMVFGISETEIRTILGAAKFRREKVFQRVDTLSKGELTRAAIVWATLSKAEFLFMDE
PTNHLDIESLEVLDVLIENFKGGMLFISHDRHFISRHAREVYYLSDKKLSRMNL
>Mature_534_residues
MLHIKNLRIEFDEFILIDNISFDVVPGEVLAITGPNGCGKTSLIRAIKGELPYEGTVFVEKGKKIAFVPQENPESNERVV
EFILQEFPEIHRIKKLLESQVDDPLICANLLDEYAGMSGFELEDRIVRELLRLGFGRQELEKSVSDFSEGEKRLLLVTRA
ILKDPDLIILDEPTNHLDISMIMRLEEEILRLKKSGKAFIVISHDRTFVDKIADRTLFIQRGKAVTVRGGFSLMRAHLQN
KFESDLRRAQEISRKIRQLEQEVARRKEWSRKKESQKKFADKVMNKGYIGRKSAKLAKRARAVEKRVEELIDKLKAEKPF
IEKRLKMLFPYYEVAERKLLSCENLSFSYDTKDLFSDINLDLTTKDRAAIVGPNGTGKTTLLKCLIGALKPKTGQIYMNK
NVNWVYLPQRIETFFQKEILLDTFMVFGISETEIRTILGAAKFRREKVFQRVDTLSKGELTRAAIVWATLSKAEFLFMDE
PTNHLDIESLEVLDVLIENFKGGMLFISHDRHFISRHAREVYYLSDKKLSRMNL

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI27881506, Length=549, Percent_Identity=27.6867030965392, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI10947137, Length=549, Percent_Identity=27.6867030965392, Blast_Score=184, Evalue=3e-46,
Organism=Homo sapiens, GI148612853, Length=549, Percent_Identity=27.6867030965392, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI10947135, Length=527, Percent_Identity=24.4781783681214, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI69354671, Length=527, Percent_Identity=24.4781783681214, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI27477115, Length=246, Percent_Identity=28.8617886178862, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI153792144, Length=239, Percent_Identity=30.1255230125523, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1789751, Length=543, Percent_Identity=29.097605893186, Blast_Score=223, Evalue=3e-59,
Organism=Escherichia coli, GI1787041, Length=543, Percent_Identity=28.5451197053407, Blast_Score=209, Evalue=4e-55,
Organism=Escherichia coli, GI2367384, Length=533, Percent_Identity=28.8930581613508, Blast_Score=181, Evalue=1e-46,
Organism=Escherichia coli, GI1787182, Length=543, Percent_Identity=27.255985267035, Blast_Score=163, Evalue=3e-41,
Organism=Escherichia coli, GI1788225, Length=231, Percent_Identity=27.7056277056277, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1788165, Length=194, Percent_Identity=28.8659793814433, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789672, Length=235, Percent_Identity=25.9574468085106, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI145693107, Length=248, Percent_Identity=25.4032258064516, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1789962, Length=217, Percent_Identity=24.4239631336406, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787972, Length=244, Percent_Identity=28.6885245901639, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787029, Length=232, Percent_Identity=27.1551724137931, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787500, Length=210, Percent_Identity=26.1904761904762, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI87081791, Length=229, Percent_Identity=26.6375545851528, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1790525, Length=213, Percent_Identity=27.2300469483568, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI1789864, Length=249, Percent_Identity=23.6947791164659, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786563, Length=215, Percent_Identity=27.906976744186, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790162, Length=239, Percent_Identity=22.1757322175732, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790467, Length=233, Percent_Identity=24.4635193133047, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787758, Length=212, Percent_Identity=24.5283018867925, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI48995001, Length=213, Percent_Identity=26.2910798122066, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI48994883, Length=249, Percent_Identity=26.9076305220884, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786872, Length=232, Percent_Identity=25.8620689655172, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1786398, Length=233, Percent_Identity=26.6094420600858, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788506, Length=227, Percent_Identity=25.9911894273128, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787712, Length=220, Percent_Identity=25.4545454545455, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI87081834, Length=212, Percent_Identity=27.8301886792453, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1789991, Length=236, Percent_Identity=27.1186440677966, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1789873, Length=218, Percent_Identity=27.9816513761468, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1789891, Length=223, Percent_Identity=24.2152466367713, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789963, Length=276, Percent_Identity=25, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788897, Length=215, Percent_Identity=25.5813953488372, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87082267, Length=214, Percent_Identity=25.7009345794392, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1788644, Length=233, Percent_Identity=23.6051502145923, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1790534, Length=205, Percent_Identity=26.8292682926829, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1787089, Length=221, Percent_Identity=25.3393665158371, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1789593, Length=226, Percent_Identity=24.3362831858407, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1790190, Length=212, Percent_Identity=23.5849056603774, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=549, Percent_Identity=26.0473588342441, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI17555318, Length=544, Percent_Identity=26.6544117647059, Blast_Score=177, Evalue=9e-45,
Organism=Caenorhabditis elegans, GI17553372, Length=526, Percent_Identity=27.3764258555133, Blast_Score=156, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI115533608, Length=246, Percent_Identity=28.0487804878049, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=551, Percent_Identity=24.6823956442831, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6321121, Length=560, Percent_Identity=27.3214285714286, Blast_Score=161, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6325030, Length=406, Percent_Identity=22.9064039408867, Blast_Score=83, Evalue=9e-17,
Organism=Saccharomyces cerevisiae, GI6323278, Length=202, Percent_Identity=29.2079207920792, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6324314, Length=225, Percent_Identity=27.5555555555556, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24642252, Length=545, Percent_Identity=27.8899082568807, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI18859989, Length=545, Percent_Identity=27.8899082568807, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24666836, Length=546, Percent_Identity=27.2893772893773, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24641342, Length=546, Percent_Identity=26.5567765567766, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24643674, Length=271, Percent_Identity=25.830258302583, Blast_Score=74, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61725; Mature: 61725

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHIKNLRIEFDEFILIDNISFDVVPGEVLAITGPNGCGKTSLIRAIKGELPYEGTVFVE
CCEEECEEEEECCEEEEECCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEE
KGKKIAFVPQENPESNERVVEFILQEFPEIHRIKKLLESQVDDPLICANLLDEYAGMSGF
CCCEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
ELEDRIVRELLRLGFGRQELEKSVSDFSEGEKRLLLVTRAILKDPDLIILDEPTNHLDIS
CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHH
MIMRLEEEILRLKKSGKAFIVISHDRTFVDKIADRTLFIQRGKAVTVRGGFSLMRAHLQN
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCEEEEECCCEEEEECCHHHHHHHHHH
KFESDLRRAQEISRKIRQLEQEVARRKEWSRKKESQKKFADKVMNKGYIGRKSAKLAKRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
RAVEKRVEELIDKLKAEKPFIEKRLKMLFPYYEVAERKLLSCENLSFSYDTKDLFSDINL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC
DLTTKDRAAIVGPNGTGKTTLLKCLIGALKPKTGQIYMNKNVNWVYLPQRIETFFQKEIL
EEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEECHHHHHHHHHHHHH
LDTFMVFGISETEIRTILGAAKFRREKVFQRVDTLSKGELTRAAIVWATLSKAEFLFMDE
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCEEEEECC
PTNHLDIESLEVLDVLIENFKGGMLFISHDRHFISRHAREVYYLSDKKLSRMNL
CCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHEEEEECCCCHHHCCC
>Mature Secondary Structure
MLHIKNLRIEFDEFILIDNISFDVVPGEVLAITGPNGCGKTSLIRAIKGELPYEGTVFVE
CCEEECEEEEECCEEEEECCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEE
KGKKIAFVPQENPESNERVVEFILQEFPEIHRIKKLLESQVDDPLICANLLDEYAGMSGF
CCCEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
ELEDRIVRELLRLGFGRQELEKSVSDFSEGEKRLLLVTRAILKDPDLIILDEPTNHLDIS
CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHH
MIMRLEEEILRLKKSGKAFIVISHDRTFVDKIADRTLFIQRGKAVTVRGGFSLMRAHLQN
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCEEEEECCCEEEEECCHHHHHHHHHH
KFESDLRRAQEISRKIRQLEQEVARRKEWSRKKESQKKFADKVMNKGYIGRKSAKLAKRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
RAVEKRVEELIDKLKAEKPFIEKRLKMLFPYYEVAERKLLSCENLSFSYDTKDLFSDINL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC
DLTTKDRAAIVGPNGTGKTTLLKCLIGALKPKTGQIYMNKNVNWVYLPQRIETFFQKEIL
EEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEECHHHHHHHHHHHHH
LDTFMVFGISETEIRTILGAAKFRREKVFQRVDTLSKGELTRAAIVWATLSKAEFLFMDE
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCEEEEECC
PTNHLDIESLEVLDVLIENFKGGMLFISHDRHFISRHAREVYYLSDKKLSRMNL
CCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHEEEEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]