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The map label for this gene is scpB [H]

Identifier: 239617258

GI number: 239617258

Start: 911690

End: 912307

Strand: Direct

Name: scpB [H]

Synonym: Kole_0866

Alternate gene names: 239617258

Gene position: 911690-912307 (Clockwise)

Preceding gene: 239617257

Following gene: 239617259

Centisome position: 39.6

GC content: 43.69

Gene sequence:

>618_bases
ATGAGTGAAGGGATCTCCAAAAAAGCAGCCATAGAGGCGATGATCTTCGCATCTCGCCAGGGAATTACCTCCAAAAAGAT
GGCGAAAATTCTTGAATTGAAGGAAAATCAACTTCTCCTTATACTGGAAGAATTACAGGAGGAGTACGCCAATAATCCGA
ACCGAGGCGTCATTTTAAGACAGGTCAACGGGAAATTCAGATTCTACACAAAAAAAGAGGTACAAAAATATGTCACAGAA
GTAATCAGACGTCCTATCGCAAGAATAACCGATTCTCAACTTGAAGTCCTTGCCATAGTCGCCATAAGAGGGCCTGTAAC
AAGGACCGATGTCGAGCTGATGCGCGGAAAATCCTCACAATCGCAGCTCCTCGAACTTCAAAAAATGGGACTTTTAAGGA
AGAGGCGTTCAAAACTTCCTGGAAGGCCTTATCTGTATAAAGTAACCCAGAAATTCTATGATACCTTCCAGCTAAACGAC
CTTTCTGAAATAGTGGAGGGATTGGAAGGAAAAATTGTGGAAACGAAGGAGGTAAACCCTTCTGAAACTTCAGAGGTTTC
TTCAACTGAACAGCCACCTGTCGAGGCGGAAAGCGGGGGAAGCGATAAAGGGAAATAG

Upstream 100 bases:

>100_bases
AAGTGGTGGTAACCTTTCTTGCAGTTCTTGAACTTATTAAGCTTGGTAGGTACATAATAGTAACCCTCGAGCCCACGCCA
TTGTTCAGGAGGGTACATAA

Downstream 100 bases:

>100_bases
GGTTCTCATAAACGGTAAGCCCGTGACGGAACCATGGTTTGAAATTGATCCCGTAAAAGATTCGATCACACTCGACGGGA
AGAAAGTAAGGCCCAGAAAG

Product: chromosome segregation and condensation protein, ScpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSEGISKKAAIEAMIFASRQGITSKKMAKILELKENQLLLILEELQEEYANNPNRGVILRQVNGKFRFYTKKEVQKYVTE
VIRRPIARITDSQLEVLAIVAIRGPVTRTDVELMRGKSSQSQLLELQKMGLLRKRRSKLPGRPYLYKVTQKFYDTFQLND
LSEIVEGLEGKIVETKEVNPSETSEVSSTEQPPVEAESGGSDKGK

Sequences:

>Translated_205_residues
MSEGISKKAAIEAMIFASRQGITSKKMAKILELKENQLLLILEELQEEYANNPNRGVILRQVNGKFRFYTKKEVQKYVTE
VIRRPIARITDSQLEVLAIVAIRGPVTRTDVELMRGKSSQSQLLELQKMGLLRKRRSKLPGRPYLYKVTQKFYDTFQLND
LSEIVEGLEGKIVETKEVNPSETSEVSSTEQPPVEAESGGSDKGK
>Mature_204_residues
SEGISKKAAIEAMIFASRQGITSKKMAKILELKENQLLLILEELQEEYANNPNRGVILRQVNGKFRFYTKKEVQKYVTEV
IRRPIARITDSQLEVLAIVAIRGPVTRTDVELMRGKSSQSQLLELQKMGLLRKRRSKLPGRPYLYKVTQKFYDTFQLNDL
SEIVEGLEGKIVETKEVNPSETSEVSSTEQPPVEAESGGSDKGK

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 23203; Mature: 23072

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEGISKKAAIEAMIFASRQGITSKKMAKILELKENQLLLILEELQEEYANNPNRGVILR
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEE
QVNGKFRFYTKKEVQKYVTEVIRRPIARITDSQLEVLAIVAIRGPVTRTDVELMRGKSSQ
EECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCHHHHHHHHCCCHH
SQLLELQKMGLLRKRRSKLPGRPYLYKVTQKFYDTFQLNDLSEIVEGLEGKIVETKEVNP
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCC
SETSEVSSTEQPPVEAESGGSDKGK
CCCHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEGISKKAAIEAMIFASRQGITSKKMAKILELKENQLLLILEELQEEYANNPNRGVILR
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEE
QVNGKFRFYTKKEVQKYVTEVIRRPIARITDSQLEVLAIVAIRGPVTRTDVELMRGKSSQ
EECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCHHHHHHHHCCCHH
SQLLELQKMGLLRKRRSKLPGRPYLYKVTQKFYDTFQLNDLSEIVEGLEGKIVETKEVNP
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCC
SETSEVSSTEQPPVEAESGGSDKGK
CCCHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA