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The map label for this gene is scpA [H]

Identifier: 239617257

GI number: 239617257

Start: 911001

End: 911693

Strand: Direct

Name: scpA [H]

Synonym: Kole_0865

Alternate gene names: 239617257

Gene position: 911001-911693 (Clockwise)

Preceding gene: 239617256

Following gene: 239617258

Centisome position: 39.57

GC content: 38.96

Gene sequence:

>693_bases
GTGGAACAGATGAAACTTATATTCACGCTTCCAGAGTTTGAAGGTCCGCTTGACCTTCTACTCTTTCTTGTTAGAAAACA
TCGCGTGGATATAAGGTCGATTCCCATAACGGTTATCGCAGATGAGTTTATCGTACACATAGAAAAGATGAAGTCTCTTG
ATATGGTTGTAACTTCCGATTTTTTGCTCATGGCATCGACTTTATTGCAGATGAAATCAAAGGCACTCCTTCCAAGGCTA
AGTCCAAAAGAGGCACAGGAACTTGAAAAACAACAGAAAGAATTGTACAGGCAGGTTGAAGAATATCAAACGCTTAAAGA
ACTATCAAAGCGGCTCAAGATAAAGCTCTACGAATCTTCTTCCTACGAAAGAGTCAAGGTCGATACCCCTGAAACAGTAT
CATATTCCGAAGAATTACCACAAAAACTCGCAGAAGCTTTCAGAGCAATACTGAAGGAAACCGTAGAAAAAGAAAGAGTT
TATACGATAACATCCGAATTGTACAGCGTAGAAGACAGAATGGAAGAAATAGAAAAGGAATACGAAGAAATTAGATTAAT
GGAAATACTTAAACAAAAGACCCGTATTGAAGTGGTGGTAACCTTTCTTGCAGTTCTTGAACTTATTAAGCTTGGTAGGT
ACATAATAGTAACCCTCGAGCCCACGCCATTGTTCAGGAGGGTACATAAATGA

Upstream 100 bases:

>100_bases
AGGTGAAGAAGATAATTAAAGAAGGAAATGCTAAAGCTCGGGCGTTCGCACAGGAAACGATGAGACTCGTTTACGATGCT
ATGAAATTCGGGTGGTAATA

Downstream 100 bases:

>100_bases
GTGAAGGGATCTCCAAAAAAGCAGCCATAGAGGCGATGATCTTCGCATCTCGCCAGGGAATTACCTCCAAAAAGATGGCG
AAAATTCTTGAATTGAAGGA

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MEQMKLIFTLPEFEGPLDLLLFLVRKHRVDIRSIPITVIADEFIVHIEKMKSLDMVVTSDFLLMASTLLQMKSKALLPRL
SPKEAQELEKQQKELYRQVEEYQTLKELSKRLKIKLYESSSYERVKVDTPETVSYSEELPQKLAEAFRAILKETVEKERV
YTITSELYSVEDRMEEIEKEYEEIRLMEILKQKTRIEVVVTFLAVLELIKLGRYIIVTLEPTPLFRRVHK

Sequences:

>Translated_230_residues
MEQMKLIFTLPEFEGPLDLLLFLVRKHRVDIRSIPITVIADEFIVHIEKMKSLDMVVTSDFLLMASTLLQMKSKALLPRL
SPKEAQELEKQQKELYRQVEEYQTLKELSKRLKIKLYESSSYERVKVDTPETVSYSEELPQKLAEAFRAILKETVEKERV
YTITSELYSVEDRMEEIEKEYEEIRLMEILKQKTRIEVVVTFLAVLELIKLGRYIIVTLEPTPLFRRVHK
>Mature_230_residues
MEQMKLIFTLPEFEGPLDLLLFLVRKHRVDIRSIPITVIADEFIVHIEKMKSLDMVVTSDFLLMASTLLQMKSKALLPRL
SPKEAQELEKQQKELYRQVEEYQTLKELSKRLKIKLYESSSYERVKVDTPETVSYSEELPQKLAEAFRAILKETVEKERV
YTITSELYSVEDRMEEIEKEYEEIRLMEILKQKTRIEVVVTFLAVLELIKLGRYIIVTLEPTPLFRRVHK

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 27241; Mature: 27241

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQMKLIFTLPEFEGPLDLLLFLVRKHRVDIRSIPITVIADEFIVHIEKMKSLDMVVTSD
CCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLLMASTLLQMKSKALLPRLSPKEAQELEKQQKELYRQVEEYQTLKELSKRLKIKLYESS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
SYERVKVDTPETVSYSEELPQKLAEAFRAILKETVEKERVYTITSELYSVEDRMEEIEKE
CCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEEIRLMEILKQKTRIEVVVTFLAVLELIKLGRYIIVTLEPTPLFRRVHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCC
>Mature Secondary Structure
MEQMKLIFTLPEFEGPLDLLLFLVRKHRVDIRSIPITVIADEFIVHIEKMKSLDMVVTSD
CCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLLMASTLLQMKSKALLPRLSPKEAQELEKQQKELYRQVEEYQTLKELSKRLKIKLYESS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
SYERVKVDTPETVSYSEELPQKLAEAFRAILKETVEKERVYTITSELYSVEDRMEEIEKE
CCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEEIRLMEILKQKTRIEVVVTFLAVLELIKLGRYIIVTLEPTPLFRRVHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]