Click here to switch to the map view.

The map label for this gene is 239616846

Identifier: 239616846

GI number: 239616846

Start: 471042

End: 471401

Strand: Direct

Name: 239616846

Synonym: Kole_0441

Alternate gene names: NA

Gene position: 471042-471401 (Clockwise)

Preceding gene: 239616845

Following gene: 239616847

Centisome position: 20.46

GC content: 37.22

Gene sequence:

>360_bases
GTGTTTTCTTTTAAGGTTGTAGATGAGAAATTCGCCATCATAAGCGTTGAAGAAAGGTCACGTATCACCGGCAAGATCCC
TGCGGAGTTCAAAAAATGGTTCGAATCCAAAAAACTGGATACCTACAAAGCGGTCATTCTGGATGGTAGAAATATAGAAT
TCGTTGATAGCATGGGCATTGCTTCTTTCATAAGCCTTTACAAGATTCTCAGCCAAAAAAACATTCCTTTTGCTGTTTGC
GGATTAAACAGCGAGGTAAGAAATCTTTTCAAACTTCTCAAACTCGACAAGATATTTGTTATGGATTGCAATTCACCTGA
AGACTTTATAAAAAACTTAGGGGATGATTCTCATGATTAA

Upstream 100 bases:

>100_bases
AACCTATAAAAATGGCGAGCATTTCGAGGACGATGTTACTATAATAGGTATAGAATTCACCGGCTGAATGTTTTCATTAA
AAAAAAACAGGGGGGATATC

Downstream 100 bases:

>100_bases
AGAGCTGGTTATCGACCAGGATAGATTCACAGCGTCTTCCTGTAGTGAGTTGCTTTCAACCATCGAAAAATTGACAGATT
TCGATATTCTCGCCCTGAAC

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MFSFKVVDEKFAIISVEERSRITGKIPAEFKKWFESKKLDTYKAVILDGRNIEFVDSMGIASFISLYKILSQKNIPFAVC
GLNSEVRNLFKLLKLDKIFVMDCNSPEDFIKNLGDDSHD

Sequences:

>Translated_119_residues
MFSFKVVDEKFAIISVEERSRITGKIPAEFKKWFESKKLDTYKAVILDGRNIEFVDSMGIASFISLYKILSQKNIPFAVC
GLNSEVRNLFKLLKLDKIFVMDCNSPEDFIKNLGDDSHD
>Mature_119_residues
MFSFKVVDEKFAIISVEERSRITGKIPAEFKKWFESKKLDTYKAVILDGRNIEFVDSMGIASFISLYKILSQKNIPFAVC
GLNSEVRNLFKLLKLDKIFVMDCNSPEDFIKNLGDDSHD

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13677; Mature: 13677

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSFKVVDEKFAIISVEERSRITGKIPAEFKKWFESKKLDTYKAVILDGRNIEFVDSMGI
CCCEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEHHHCCH
ASFISLYKILSQKNIPFAVCGLNSEVRNLFKLLKLDKIFVMDCNSPEDFIKNLGDDSHD
HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MFSFKVVDEKFAIISVEERSRITGKIPAEFKKWFESKKLDTYKAVILDGRNIEFVDSMGI
CCCEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEHHHCCH
ASFISLYKILSQKNIPFAVCGLNSEVRNLFKLLKLDKIFVMDCNSPEDFIKNLGDDSHD
HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA