| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616847
Identifier: 239616847
GI number: 239616847
Start: 471394
End: 471705
Strand: Direct
Name: 239616847
Synonym: Kole_0442
Alternate gene names: NA
Gene position: 471394-471705 (Clockwise)
Preceding gene: 239616846
Following gene: 239616848
Centisome position: 20.48
GC content: 41.03
Gene sequence:
>312_bases ATGATTAAAGAGCTGGTTATCGACCAGGATAGATTCACAGCGTCTTCCTGTAGTGAGTTGCTTTCAACCATCGAAAAATT GACAGATTTCGATATTCTCGCCCTGAACATGAAAAACGTGCAATTAATAGACTCCTCCGGCGTGGCCACGCTTCTTATTT TGAGGAGAAAGCTCGAATTCAAGGGTAAACGACTTGTGATTCTTTCGCCCACACCCAACGTTAAAAGGGTATTTATGATA ATGGGAATAAACAAGGTTCTGGAAATCGTTGACAATCTCAGTGAAGTGAGCGATAACCGTGAAAAGAAATAA
Upstream 100 bases:
>100_bases GAGGTAAGAAATCTTTTCAAACTTCTCAAACTCGACAAGATATTTGTTATGGATTGCAATTCACCTGAAGACTTTATAAA AAACTTAGGGGATGATTCTC
Downstream 100 bases:
>100_bases GTGGTCCTTTGAAATAAAGGCTTCTTTGGAAGCAGTCGACGCGCTTGCCTCTCAGATATTCAGGATGGTTGCTTCCGAAA AAAGCAACGAACTAGGGTTT
Product: anti-sigma-factor antagonist
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MIKELVIDQDRFTASSCSELLSTIEKLTDFDILALNMKNVQLIDSSGVATLLILRRKLEFKGKRLVILSPTPNVKRVFMI MGINKVLEIVDNLSEVSDNREKK
Sequences:
>Translated_103_residues MIKELVIDQDRFTASSCSELLSTIEKLTDFDILALNMKNVQLIDSSGVATLLILRRKLEFKGKRLVILSPTPNVKRVFMI MGINKVLEIVDNLSEVSDNREKK >Mature_103_residues MIKELVIDQDRFTASSCSELLSTIEKLTDFDILALNMKNVQLIDSSGVATLLILRRKLEFKGKRLVILSPTPNVKRVFMI MGINKVLEIVDNLSEVSDNREKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11693; Mature: 11693
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKELVIDQDRFTASSCSELLSTIEKLTDFDILALNMKNVQLIDSSGVATLLILRRKLEF CCCHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCHHHHHHHHHHHCC KGKRLVILSPTPNVKRVFMIMGINKVLEIVDNLSEVSDNREKK CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIKELVIDQDRFTASSCSELLSTIEKLTDFDILALNMKNVQLIDSSGVATLLILRRKLEF CCCHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCHHHHHHHHHHHCC KGKRLVILSPTPNVKRVFMIMGINKVLEIVDNLSEVSDNREKK CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA