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The map label for this gene is atpH [H]

Identifier: 239616628

GI number: 239616628

Start: 250848

End: 251375

Strand: Reverse

Name: atpH [H]

Synonym: Kole_0221

Alternate gene names: 239616628

Gene position: 251375-250848 (Counterclockwise)

Preceding gene: 239616629

Following gene: 239616627

Centisome position: 10.92

GC content: 44.89

Gene sequence:

>528_bases
GTGAAACGTTCACTGACTGTCGCTTATAAATACGCGAAGGCGTTGTTCCTGATGACAGATGAATCTGAAAGGGACGGGAT
ACTTGAGCTTCTGAAAGCCTCCAGCGAGATGTTCTCTGATAAGAAAGCCCGGGAATTCCTTCAGGATCCGACGTTTCCGC
GCTCTGAGGCTGTGAAATTGATTCTTGAGTTTCTGGAAGACGTTCCTGAGATATTCAAAAACTTCGTGGTTATTCTGGTT
GAAAAGAAAAGATTGCTGTATCTGCCCACCATTACAAACGCTTACGAACAGATCTTAGATGAGTCCCGTAGCAAGATAAA
GGTCCTTGTGGAAACTGCCGTTGCACTATCGAACGAAGAGTTGAAGCTCCTTGAGGAGTTCATAGAGAGAGAATCGGGGA
TGAGACCATTATTCCAGATCCAGATCAAGCCGGAGCTGATAGCGGGAATGGTGGTACATTTTCAGGATAGAGTCCTTGAT
TTGAGTGCTTCTGGAAGGCTAAAACGTTTAGAGTATGGGCTTAAATAA

Upstream 100 bases:

>100_bases
CGGCGGTTGAAATTGCCGCTAAGTTTCTTGGTAAAGAGATGGATGAAGCCATGAAGAGGCAGTACGCTCAGAGGATTCTC
AGGAGTTTAGGTGATGAGAA

Downstream 100 bases:

>100_bases
GAATGGCAGCCACTTTTTGGAGGTGGTTAAGTGAAGATCAGTCCTTCAGAGATAACGAAGATAATTGAAGAGCAATTGAA
GCGTTCCGACCGGGAAATAG

Product: ATP synthase F1, delta subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKRSLTVAYKYAKALFLMTDESERDGILELLKASSEMFSDKKAREFLQDPTFPRSEAVKLILEFLEDVPEIFKNFVVILV
EKKRLLYLPTITNAYEQILDESRSKIKVLVETAVALSNEELKLLEEFIERESGMRPLFQIQIKPELIAGMVVHFQDRVLD
LSASGRLKRLEYGLK

Sequences:

>Translated_175_residues
MKRSLTVAYKYAKALFLMTDESERDGILELLKASSEMFSDKKAREFLQDPTFPRSEAVKLILEFLEDVPEIFKNFVVILV
EKKRLLYLPTITNAYEQILDESRSKIKVLVETAVALSNEELKLLEEFIERESGMRPLFQIQIKPELIAGMVVHFQDRVLD
LSASGRLKRLEYGLK
>Mature_175_residues
MKRSLTVAYKYAKALFLMTDESERDGILELLKASSEMFSDKKAREFLQDPTFPRSEAVKLILEFLEDVPEIFKNFVVILV
EKKRLLYLPTITNAYEQILDESRSKIKVLVETAVALSNEELKLLEEFIERESGMRPLFQIQIKPELIAGMVVHFQDRVLD
LSASGRLKRLEYGLK

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Caenorhabditis elegans, GI71984710, Length=167, Percent_Identity=29.3413173652695, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 20274; Mature: 20274

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSLTVAYKYAKALFLMTDESERDGILELLKASSEMFSDKKAREFLQDPTFPRSEAVKL
CCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ILEFLEDVPEIFKNFVVILVEKKRLLYLPTITNAYEQILDESRSKIKVLVETAVALSNEE
HHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LKLLEEFIERESGMRPLFQIQIKPELIAGMVVHFQDRVLDLSASGRLKRLEYGLK
HHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCC
>Mature Secondary Structure
MKRSLTVAYKYAKALFLMTDESERDGILELLKASSEMFSDKKAREFLQDPTFPRSEAVKL
CCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ILEFLEDVPEIFKNFVVILVEKKRLLYLPTITNAYEQILDESRSKIKVLVETAVALSNEE
HHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LKLLEEFIERESGMRPLFQIQIKPELIAGMVVHFQDRVLDLSASGRLKRLEYGLK
HHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA