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The map label for this gene is atpF [H]

Identifier: 239616629

GI number: 239616629

Start: 251372

End: 251857

Strand: Reverse

Name: atpF [H]

Synonym: Kole_0222

Alternate gene names: 239616629

Gene position: 251857-251372 (Counterclockwise)

Preceding gene: 239616630

Following gene: 239616628

Centisome position: 10.94

GC content: 43.0

Gene sequence:

>486_bases
ATGATAGAACTCAACCTGACATCACTCATACAGCTTTTGAATTTTCTTGTGCTTCTCTTTGTGTTGAAAAAACTGCTTTT
TGATAAGTTCTTCGACATCATCGAAGAAAGGCAGAACATGATAAAGTCAGAACTAACTGAAGCTGAAAAGCTGAGGAAAG
AGGCAGAAGCCTATCGGGAAAAATACCGCATAGAGATGGAAAACGCCCGGAAAAAGTCTCAGGAAATCATTGCTAATGCT
GAGAGACAAGCCGAAGAAATAATAAAAACAGCCAAAGAGAACGCACAGAGAGAAGCGGTCAGGATCATGGAATCAGCCGA
AGCGCAGATCGCACAGGAAAAGGAAAAAGCGTTGAAACAGCTTCAGGCAACGGTCATTACAACGGCGGTTGAAATTGCCG
CTAAGTTTCTTGGTAAAGAGATGGATGAAGCCATGAAGAGGCAGTACGCTCAGAGGATTCTCAGGAGTTTAGGTGATGAG
AAGTGA

Upstream 100 bases:

>100_bases
GGCTGTTACCGAATCTACCGGTCTTTATTCACTTGTTATAGCGTTTATGATCCTTTTGGTGGGCTAACGAAGAGTCCCCA
CCGAAAAGGGGGTTTAAGGC

Downstream 100 bases:

>100_bases
AACGTTCACTGACTGTCGCTTATAAATACGCGAAGGCGTTGTTCCTGATGACAGATGAATCTGAAAGGGACGGGATACTT
GAGCTTCTGAAAGCCTCCAG

Product: ATP synthase F0, B subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MIELNLTSLIQLLNFLVLLFVLKKLLFDKFFDIIEERQNMIKSELTEAEKLRKEAEAYREKYRIEMENARKKSQEIIANA
ERQAEEIIKTAKENAQREAVRIMESAEAQIAQEKEKALKQLQATVITTAVEIAAKFLGKEMDEAMKRQYAQRILRSLGDE
K

Sequences:

>Translated_161_residues
MIELNLTSLIQLLNFLVLLFVLKKLLFDKFFDIIEERQNMIKSELTEAEKLRKEAEAYREKYRIEMENARKKSQEIIANA
ERQAEEIIKTAKENAQREAVRIMESAEAQIAQEKEKALKQLQATVITTAVEIAAKFLGKEMDEAMKRQYAQRILRSLGDE
K
>Mature_161_residues
MIELNLTSLIQLLNFLVLLFVLKKLLFDKFFDIIEERQNMIKSELTEAEKLRKEAEAYREKYRIEMENARKKSQEIIANA
ERQAEEIIKTAKENAQREAVRIMESAEAQIAQEKEKALKQLQATVITTAVEIAAKFLGKEMDEAMKRQYAQRILRSLGDE
K

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 18793; Mature: 18793

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELNLTSLIQLLNFLVLLFVLKKLLFDKFFDIIEERQNMIKSELTEAEKLRKEAEAYRE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYRIEMENARKKSQEIIANAERQAEEIIKTAKENAQREAVRIMESAEAQIAQEKEKALKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQATVITTAVEIAAKFLGKEMDEAMKRQYAQRILRSLGDEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIELNLTSLIQLLNFLVLLFVLKKLLFDKFFDIIEERQNMIKSELTEAEKLRKEAEAYRE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYRIEMENARKKSQEIIANAERQAEEIIKTAKENAQREAVRIMESAEAQIAQEKEKALKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQATVITTAVEIAAKFLGKEMDEAMKRQYAQRILRSLGDEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA