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The map label for this gene is 238925694

Identifier: 238925694

GI number: 238925694

Start: 3171443

End: 3171838

Strand: Reverse

Name: 238925694

Synonym: EUBREC_3351

Alternate gene names: NA

Gene position: 3171838-3171443 (Counterclockwise)

Preceding gene: 238925695

Following gene: 238925693

Centisome position: 91.95

GC content: 41.41

Gene sequence:

>396_bases
ATGGATTTTTCATTTCCTGATGTTGACAAGGTGCTTTATGGTAAACACGCAAAGAACGTTATGAAGACTGATGTCAAGGA
AACAGACAATAGCTACGAAGTAGATATAGATCTTCCGGGATTCAAGAAGGATGAGATTGAGGCTAAGCTGGAGAATGGTT
ACTTAACTATCAGCGCAGCCAAAGGACTTGACAAGGAAGAGAAGGATGAAAAGGATGGCAAGTACATCCGCAAGGAGCGC
TATTCCGGTGCTATGAGCAGGTCTTTCTATGTAGGCAATGAGCTGAAACAGGAAGATATCAAGGCAAAGTATCAGGACGG
TATTCTTAAACTTTCAGTTCCGAAGAAGGAGCAAAAGAAAGTTGAGACCACAAAGCATATTGCTATTGAAGGATAA

Upstream 100 bases:

>100_bases
TCCAAAGAAACAGGTTGACACAGATTTTATAGATTAAGAAGGAGAGATGACTTATGTTGATGCCTAGTATTTTGGAGAAA
ACTTATTTAACGATGATTGG

Downstream 100 bases:

>100_bases
AATTAATTTAAATCATCTTATGAGAAGTCGCACAGGCCTATGGCCTGGGCGGCTTTTTAAATTAAAATACAAAGGAGCAG
TATGATGTTTGCATTAGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MDFSFPDVDKVLYGKHAKNVMKTDVKETDNSYEVDIDLPGFKKDEIEAKLENGYLTISAAKGLDKEEKDEKDGKYIRKER
YSGAMSRSFYVGNELKQEDIKAKYQDGILKLSVPKKEQKKVETTKHIAIEG

Sequences:

>Translated_131_residues
MDFSFPDVDKVLYGKHAKNVMKTDVKETDNSYEVDIDLPGFKKDEIEAKLENGYLTISAAKGLDKEEKDEKDGKYIRKER
YSGAMSRSFYVGNELKQEDIKAKYQDGILKLSVPKKEQKKVETTKHIAIEG
>Mature_131_residues
MDFSFPDVDKVLYGKHAKNVMKTDVKETDNSYEVDIDLPGFKKDEIEAKLENGYLTISAAKGLDKEEKDEKDGKYIRKER
YSGAMSRSFYVGNELKQEDIKAKYQDGILKLSVPKKEQKKVETTKHIAIEG

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 14999; Mature: 14999

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSFPDVDKVLYGKHAKNVMKTDVKETDNSYEVDIDLPGFKKDEIEAKLENGYLTISAA
CCCCCCCHHHHHHCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHEEECCCEEEEEEC
KGLDKEEKDEKDGKYIRKERYSGAMSRSFYVGNELKQEDIKAKYQDGILKLSVPKKEQKK
CCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHH
VETTKHIAIEG
HHHHHEEEECC
>Mature Secondary Structure
MDFSFPDVDKVLYGKHAKNVMKTDVKETDNSYEVDIDLPGFKKDEIEAKLENGYLTISAA
CCCCCCCHHHHHHCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHEEECCCEEEEEEC
KGLDKEEKDEKDGKYIRKERYSGAMSRSFYVGNELKQEDIKAKYQDGILKLSVPKKEQKK
CCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCEEEEECCCHHHHH
VETTKHIAIEG
HHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9657935 [H]